| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1865 |
|---|
| Symbol | |
|---|
| ID | 5733754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 2199307 |
|---|
| End bp | 2201034 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641279009 |
|---|
| Product | alpha beta-propellor repeat-containing integrin |
|---|
| Protein accession | YP_001544636 |
|---|
| Protein GI | 159898389 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGGT CAGGATTCGC ACCGCGTTGG TTTCGACGGA TCGTTTGGAT GGTTTTGCTC
GTGCAAGTAG TCGTGATCGC TGCAACCATC AGCAGTTCAC CAACTTCTGT CATGGCAACA
GCCCCTTTGT CCTCGGCAGA CTGGGCCGCA ATCCGTACCC TATTGCCATT GGAGCAACAA
GCCTACTTTA AACCGTCGCA GGTCTCAGAA ACAGATTATT TTGGCCTGAG TGTGGCCATG
TCGGGCGACA CCGTGGTCGT CGGTGCGCCA TATGAGAATA GCAGCACGGC AGGAGTCCAG
AATAGTGCCA CCCCAACCGT CGATGAATTA GCACCTGAAT CGGGGGCTGC CTATGTCTTT
GTACGCAATG GGCCAACTTG GAGTCAACAG GCCTATCTCA AAGCCTCACA AGTTTCGATA
GCAGACCTTT TTGGCTCGAG TGTGGCAGTG TCGGGCGATA CGATTGTGGT AAATGCGCTC
TATGAAGATA GCAGCACAAC AGGAGTTCAA AATAGTGCCA CTCCGACCGT TGATGAAGCT
GCGGATAGTG CTGGTGCAGC CTATGTCTTT GTGCGCAACG GGACAACTTG GAGTCAACAG
GCTTATCTCA AGGCCTCGCA AGTCTCAGAA ACAGACTTTT TTGGCGGGAC TGTGGCAGTA
TCGGGTGACA CCATTGTAGT GGGTGCACAC TTTGAGGATA GCAGCACGGC GGGAGTTCAA
AATAGTGCTA CTCCAACCGT TAATGAAGCA GCAGACAATG CTGGTGCAGC CTATGTCTTT
GTGCGCAATG GGGCAACCTG GAGTCAACAG GCCTATCTCA AAGCTTCACA GGTCACTGGA
TTATCCCCCT TTGAAGAAGG CCGCTTTGGC TGGAGCGTGG CGGTGTCGGG CGATACGATT
GTGGTTGGTG CGACCTATGA GGATAGTACT ACGGCAGGAG TCCAGAATAG TGCCACCCCA
ACCGTCGATG AATTAGCACC TGAATCGGGG GCTGCCTATG TTTTTGTGCG CAACGGGACA
ACCTGGACGC AACAGGCTTA TCTCAAGGCC TCAAATGTCT CAATGTATAA TTACTTTGGC
AGGAGCGTGG CGGTGTCGGG CGATACGATT GTGGTTGGTG CGCCCTATGA GCGTAGCAAC
ATAGCAGGAG TGCAAAACAG TGCCACACCG ACCGTGGATG AAAGCGCATT TACATTTATG
GCGGGAGCGG CGTATGTGTT TGTGCGCAAT GGAACTCAGT GGAGCCAACA GGCTTACCTA
AAGGCTTCCC AAGTGTCGAG TTCTGACGGC TTTGGCTGGA GCGTGGCGGT ATCGGGCGAC
ACTGTGGTTG TCGGGATACC CAATGAGGAT AGTGATACGG CAGGTGTTCA GCAGAGCGAC
ACCCCCGTGG TGAATGAAGA TGCGAGCGAT TCTGGGGCAG TAGTGGTGAT GGTACGCAAC
GGGACAACAT GGAGCCAGCA GGCCTATCTC AAAGCCTCAA ATGTCTCGTC ATTTGATGTG
TTTGGGAACG CCGTTGCGGT TGCTGGTGAT ACCGTGATCG TGGGTGCACC TTTCGAGAAT
GGTAGTATCG CGGGCATTCA GTATGGTTCC AGCCTCGTAG TGGATGACGA TGTGATCGAT
GCTGGAGCCA TCTATAGTTT CAGGCTCCCT GTCGTTGATC CATATTTGAT GTATCTGCCG
TTTGTGGCAA CCAGTGATCG TGCCGCAGCG CAGACCGCCG CGCAATAG
|
|---|
| Protein sequence | MDRSGFAPRW FRRIVWMVLL VQVVVIAATI SSSPTSVMAT APLSSADWAA IRTLLPLEQQ
AYFKPSQVSE TDYFGLSVAM SGDTVVVGAP YENSSTAGVQ NSATPTVDEL APESGAAYVF
VRNGPTWSQQ AYLKASQVSI ADLFGSSVAV SGDTIVVNAL YEDSSTTGVQ NSATPTVDEA
ADSAGAAYVF VRNGTTWSQQ AYLKASQVSE TDFFGGTVAV SGDTIVVGAH FEDSSTAGVQ
NSATPTVNEA ADNAGAAYVF VRNGATWSQQ AYLKASQVTG LSPFEEGRFG WSVAVSGDTI
VVGATYEDST TAGVQNSATP TVDELAPESG AAYVFVRNGT TWTQQAYLKA SNVSMYNYFG
RSVAVSGDTI VVGAPYERSN IAGVQNSATP TVDESAFTFM AGAAYVFVRN GTQWSQQAYL
KASQVSSSDG FGWSVAVSGD TVVVGIPNED SDTAGVQQSD TPVVNEDASD SGAVVVMVRN
GTTWSQQAYL KASNVSSFDV FGNAVAVAGD TVIVGAPFEN GSIAGIQYGS SLVVDDDVID
AGAIYSFRLP VVDPYLMYLP FVATSDRAAA QTAAQ
|
|---|
| |