| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1802 |
|---|
| Symbol | |
|---|
| ID | 5733704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 2091069 |
|---|
| End bp | 2092256 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641278945 |
|---|
| Product | isochorismate synthase |
|---|
| Protein accession | YP_001544573 |
|---|
| Protein GI | 159898326 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1169] Isochorismate synthase |
|---|
| TIGRFAM ID | [TIGR00543] isochorismate synthases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGTT TTGAACAAGA ACGGCTACGC GAATCGGCGT GGCAATTGCT AGACAACTAT
CAAGCAGAAT CGGCCTTTTT CTTTGCATCG CCCAATCATA CCTTGTTGGG CCAATTAAGC
TATGTTGATT TGATCAGCCA AACCGCCTTG CTTGAGCTTG AGCAACGAGT TAACGAGGCG
CTGCAACGGG CTGAACGTGG TGGTGAAGTT AATCCAGTCG TGGTTGGGGC ATTGCCTTTT
GCTCCCGATG CGGCGGCTTA TTTGGCCTTG CCATCGCGGG TGGTTTGGGC TGGCCCATTG
CACGCCGAAG CCCAACCCTA TTGGCATAAC CAGCGTTTGC CGCATTGCAG CATCGAGCCA
ATGCCAGCGC CCGAACACTA CAAACAGGGT GTGGCTCAAG CCTTGGCCAA AATGCAGGCT
GGCGATTTGC AAAAAGTTGT GCTCTCACGC TCGTTGCAAT TGACCGCCGA AGCACCGCTT
GATGTGAATT TGATTCTGGC GAATTTGGCA CGTAACAACA AAACTGGCTA TACCTTTGCG
GTGCCGTTGC CAACCCGCCG CGCGTTGGTT GGGGCTAGCC CTGAATTGTT GCTGGCGCGT
AATGGCAATC AAGTGATCGC CAATCCCTTA GCTGGTTCGA TTCCGCGCAG CGCCGACCCT
GAAGAAGATG CGCGGCGGGC AGCAGGTTTG CTCGAATCGC CCAAAGATTT GCATGAACAT
AAGGTTGTAA TTGAGGCGGT TGCGGCGGCC TTAGCGCCAT TCTGTCTGAG CCTTGATGTG
CCGCAACCAA CCGTTATTTC CACCGCGACG ATGTGGCATC TCTCAACAAC CTTGGTTGGC
GAATTAAAGC CTGATGCACC TTCATCGTTG GGTTTGGCAT TGGCCTTGCA CCCAACTCCA
GCGGTCTGTG GTACGCCTAC CGAGGTCGCC CGCGCCGCCA TCCGCGAAAT CGAGCCGTTT
GATCGCGGCT TTTTCACGGG GATGGTTGGT TGGTGCAACG CCCAAGGCGA TGGCGAATGG
ATTGTGACGA TTCGTTGTGC CGAAGTTGTT GATCAATCGT TGCGTTTATT TGCTGGTGCT
GGGGTGGTAC TAGGCTCGAC TCCTGAAGCC GAGTTGGCCG AAACTGCGGC GAAATTCCGC
ACGATGTTGT TGGCGATGGG CATCGATAGC GAAGGCGAGG TGGCCTAA
|
|---|
| Protein sequence | MSSFEQERLR ESAWQLLDNY QAESAFFFAS PNHTLLGQLS YVDLISQTAL LELEQRVNEA
LQRAERGGEV NPVVVGALPF APDAAAYLAL PSRVVWAGPL HAEAQPYWHN QRLPHCSIEP
MPAPEHYKQG VAQALAKMQA GDLQKVVLSR SLQLTAEAPL DVNLILANLA RNNKTGYTFA
VPLPTRRALV GASPELLLAR NGNQVIANPL AGSIPRSADP EEDARRAAGL LESPKDLHEH
KVVIEAVAAA LAPFCLSLDV PQPTVISTAT MWHLSTTLVG ELKPDAPSSL GLALALHPTP
AVCGTPTEVA RAAIREIEPF DRGFFTGMVG WCNAQGDGEW IVTIRCAEVV DQSLRLFAGA
GVVLGSTPEA ELAETAAKFR TMLLAMGIDS EGEVA
|
|---|
| |