Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1784 |
Symbol | |
ID | 5733686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 2072262 |
End bp | 2074331 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641278927 |
Product | hypothetical protein |
Protein accession | YP_001544555 |
Protein GI | 159898308 |
COG category | [S] Function unknown |
COG ID | [COG3299] Uncharacterized homolog of phage Mu protein gp47 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGATTC ATAAAAAACA ATTTAATGAT ATTTATGCCA GCATGGTTGC CGATTCGCGC CAGCGCTTGC CACGGCTCTC CGATTTTGAA GAAGGCAGCG TAGTTCGTTC GCTGTTTGAA TCGTTTGCCT ATGAGCTAGC CGTGCTGTAT GAGCAGATGG ATCTGGTTTA TCAGGCTGGC TTTATCGATA CCGCTGAGGG GGCACAACTT GATCGGGTGG TGGCGATTTT AGGCATCAAG CGCAACGAGC CAGATTTTGC AACAGGTAGT GTTACCTTTC AACGCGATAG CACCAGCGAA GAAACCTTGA TTCCAATTGG CACGCTGATT ACCACCAAGG AAGATCCCAA ACAAACGCCC TCCAAAAAGG CCTATATCAC AACTGAAGAG GGGCGAATTG CCCCAGGTAC AGCCACGGTT GAGGTGCATG TACGGGCCGA AGAGCGCGGC AAACACATGA CTACCGCTGA GCAAACGGTG ATCGTGATGC CCCGCCCATT GCCTGGCATC AAATCGGTGA CCAATCCTAA AGCAATTGGC TTTCGTGGGC GTGAGCGCGA AACCGATCAA GAATTGCGTG AGCGTGCCAA ACAAACCTTG CTGGCTTCAG GCCGCGCCTC AAGTTTATCG ATTGAAAATG CCTTGTTGAG TTTGCCCGAA GTCCGCGAAG TGCGGATTCA CGAAGATTTT CATAATAATC CTGAAGGCCG CCCAGGCTCG ATCGAAGTCT TTGTTGATGG CATGAACGAG CATAACGAGC GCCAATTGCG TCAACGTTTG GATGAGGTGC GGGCCGCCGG GATTTATGTG GTGCTTAAGC CAGCAGCACC GATTAATGTT GATGCAGTGA TTCATATTGC AGCGAACGAG CAGATTGCGA ATGCTGAAAA AGGCCTGCTT GAAACCCAAG TGCGCGAAGC AGTTGAGGCC TACTTTGGCC GTTTGGGTAT GGGCCAGCCC TTGCTTTTCT CGCAAATTAC CAGCGAAATT TTGCAAGTCA AAGGCGTAAA CGATCTGATT AATTTGGAAT TGCAGCTTTA TCGTGAGGCC GAAAGCAAAG CCCAAGGCCT TGTGCAGTTG ACTCGTAGCA CTAATTTGAG CCAAACCTTA TTGATCGAGT TGCCATGTGA ATTGCGCACG CTAGATAATC AACGCTTTTT GGCAACCAAT CCTGCAAGTT TTGCTCCCAA CCAAGCGATG ATTGAGCTTC AAGTGCAGGC GATGTTGGCT GGACGCAGCG GCGAACTAGC AACCAGTGCC GCCTTGTGGG AAGAATTGGT GATCAACCAA ACTAAATTGA CGATTAGCAA TCCCCAGCCA ATTTTATTGC AACGCACCAA ACACACGCCC CAAGATAAGC GTTTGGAAAG CGCCATTTCC GAGCTTTTCA ACGCTGCTAG CATTCGAGTA GCGGCTGAGC CAAAGGATTT GCCAATTTTA ATCTTTATTA AATTAGTTGA GCCAGGCTTG GAGCGCGACG AGAAACGTCG CAAAATCGAA GGCGCAATTC AAGAATATAT TGCTGGTTTG ACGCTTGGCT CAGCCATCCA AGCTAGCGAA ATCGAGAAGA AAATTCGGCT CTATCATCGC AAAGATTTTA GCTTGCGCAT GTTGGCAAAG CCCTTTCAAA GCAACGAACG CCCCGAAGAT AGTGCGATTC AGGTCAGTAT TATTGAACGG CCTGTGTTGG CTAACCTGCT GATCTATAGC GAGCGCGTCG AATTAACTGG CAAACTTGAG TTGACGGTTG CGCCCACGAC CAGCGATAGC CAACGCCGCC AAATTTGCTA TGAAGTGCGA CGGGCAATTA TGGCCTATCT CGATGATTTG GCTCCAGAGC AGGATTTAGA GCTAGCCCAA ATCGAAGCGC TTGCCAAAGC CCAGCTTCAA GTATTGCAAG TTGCTTTCAA CCCTAAACAC TGCCAGCTCT ACAATGTCTC GACCAATCCA GTTGGTGTGC TGGCTGAGCG CAATAACGGC AAAGTCGTCA AAATCGCCAG CTTCGAGAAG GTTTTTCTTG CCAGCGATAG TGCCAGCGAT CCGGCGCTGC GCTTTGTGAT ACAGGCTTAA
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Protein sequence | MTIHKKQFND IYASMVADSR QRLPRLSDFE EGSVVRSLFE SFAYELAVLY EQMDLVYQAG FIDTAEGAQL DRVVAILGIK RNEPDFATGS VTFQRDSTSE ETLIPIGTLI TTKEDPKQTP SKKAYITTEE GRIAPGTATV EVHVRAEERG KHMTTAEQTV IVMPRPLPGI KSVTNPKAIG FRGRERETDQ ELRERAKQTL LASGRASSLS IENALLSLPE VREVRIHEDF HNNPEGRPGS IEVFVDGMNE HNERQLRQRL DEVRAAGIYV VLKPAAPINV DAVIHIAANE QIANAEKGLL ETQVREAVEA YFGRLGMGQP LLFSQITSEI LQVKGVNDLI NLELQLYREA ESKAQGLVQL TRSTNLSQTL LIELPCELRT LDNQRFLATN PASFAPNQAM IELQVQAMLA GRSGELATSA ALWEELVINQ TKLTISNPQP ILLQRTKHTP QDKRLESAIS ELFNAASIRV AAEPKDLPIL IFIKLVEPGL ERDEKRRKIE GAIQEYIAGL TLGSAIQASE IEKKIRLYHR KDFSLRMLAK PFQSNERPED SAIQVSIIER PVLANLLIYS ERVELTGKLE LTVAPTTSDS QRRQICYEVR RAIMAYLDDL APEQDLELAQ IEALAKAQLQ VLQVAFNPKH CQLYNVSTNP VGVLAERNNG KVVKIASFEK VFLASDSASD PALRFVIQA
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