| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1735 |
|---|
| Symbol | |
|---|
| ID | 5733622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 2021167 |
|---|
| End bp | 2022210 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641278877 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_001544506 |
|---|
| Protein GI | 159898259 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGTTA CCATTGCCCA ACCAGCATCA CAGCCCAAAC CAAAACGTCG CGCCGCTGCG
GCTTTAGCAA TTGGCCTGCT TGTAGCATTC GGCCTCTTGC TGGTGATTAT GACCCTGAGT
ATTAATTTTG GGGCAGCCGA TGTTGCTCCC AGCACGGTCT GGGCCTCGTT ATTTGATTAT
GACCCCAGCT CAACCCAACA CCTGATTATT CGCACCTTGC GCATGCCACG GGTTTTGGTG
GCAGCAATTG TCGGGGCAAT TTTGGCCTTG GCCGGGGCGA TTATGCAGGG CTTGACCCGC
AACCCACTGG CCGATGCAGG CTTGTTGGGC ATCGAAAGCG GCGCAGCCTT GGGCGTGGTC
TTAGCAATCA CCTTCTTCGA TATCAAAACC CTCAATTTGT ATTCGATTTT TGCCTTTGCT
GGTGCAGCCG TAACAGCGGT GCTGGTGTAT AGCCTTGGCT CTTTGGGGCG CGGCGGGCCA
ACGCCACTCA AATTGACTTT GGCTGGCGCG ATGATCACGG CTTTCTGTTC CTCGTTTACC
AGCGCCATCC TGATTCTCGA CCAACAAACG CTTGATGAAG TGCGGCTTTG GTTGGCTGGC
ACGGTGGCGG GTCGCGATTT AGGCTTAATC GGCCAAAGCC TGCCCTACGT TGTGGTTGGC
ATGATATTAG CCTTGAGCCT TGGCCGTTCG CTGACCGCAA TGTCATTGGG CGAGGATGTG
GCTCGTGGCT TAGGCCAACG CACTGGCTGG GTCAAAACTA TTGCGGCAAT TGCCGTAATT
TTGTTGGCTG GCAGTGCGGT GGCGTTGGCT GGGCCGATTG GCTTTTTGGG CTTGTTGGTT
CCACACATTA TGCGCTTTAT CGTCGGCCTC GATTATCGCT GGCTCTTGCC CTATTGCGCA
ATTGGCGGCG CGTTACTGCT CGTGGTGGCC GACATCATTG GGCGGGTGAT TGTGCGCCCG
ATGGAAGTTC CGGTTGGTGT AGTAACCGCG CTACTCGGCG GCCCAATGTT TATCTACCTT
GTACGCTGGC GGGTGCAACG ATGA
|
|---|
| Protein sequence | MAVTIAQPAS QPKPKRRAAA ALAIGLLVAF GLLLVIMTLS INFGAADVAP STVWASLFDY
DPSSTQHLII RTLRMPRVLV AAIVGAILAL AGAIMQGLTR NPLADAGLLG IESGAALGVV
LAITFFDIKT LNLYSIFAFA GAAVTAVLVY SLGSLGRGGP TPLKLTLAGA MITAFCSSFT
SAILILDQQT LDEVRLWLAG TVAGRDLGLI GQSLPYVVVG MILALSLGRS LTAMSLGEDV
ARGLGQRTGW VKTIAAIAVI LLAGSAVALA GPIGFLGLLV PHIMRFIVGL DYRWLLPYCA
IGGALLLVVA DIIGRVIVRP MEVPVGVVTA LLGGPMFIYL VRWRVQR
|
|---|
| |