Gene Haur_1715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1715 
Symbol 
ID5733602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1995145 
End bp1995879 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content50% 
IMG OID641278857 
ProductMerR family transcriptional regulator 
Protein accessionYP_001544486 
Protein GI159898239 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.382422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTTG GGCGTTATTT CCGCACCGTT GACTTAGCTA AAGCAATTAA TGTGAGCGTG 
CAACAAGTGC GCAATTATCA AGCTGAGGGC TTTTTGCCCA ACGTCGAACG CGGCTCCAAC
GGCTACCGTC AATATACCCA ACAGCATATT GATGCGATTA AAACTGCCCA TCAACTTATC
AAGGGGTATG GTTGGCGGAA TGCTCAGCAG ATTATGGCGG CATTGCATCA GGCCAATCAT
CAAACAGCGT TTAATCTGAT CAACCAACAT CATGCCAAGC TGGATAGCAT TCGCCAGCAG
CTTGACCAAA CCCTGACCTT GCTCAAAGCC GTGGCCGATC AATTACCACC AAGCCCGCGC
CATAGCCAGC GTATCTTGGT TGGTGAGGCT GCCAAAGCCG TGGGCGTGCC CATCTCGGCC
TTGCGCTTTT GGGAGCAACA AGGCCTTTTG CAGCCAATTC GCCAAGCCTC GAACAACTAT
CGCTATTATG ATGAACGCCA ATTGCGTCGC CTACGAATTA TCGTTTTATT ACGTCAAGCT
AATGCTGATT TTAGCTCAAT TCGCACAACC TTAGAAACGC TTGATCAACA ACAACCGCAA
CGGGCCGTTG CTGCAATCGA ACAGCGCCGC GTCGCTTTGG CCCAACAAAG CTGGGAATGT
TTACAAGCAA CCACGGCGTT GGTGAGCTAT ATTCAAACCT ATGTGCCGCT GCAACCAATC
CCAATTATTG AGTAA
 
Protein sequence
MNVGRYFRTV DLAKAINVSV QQVRNYQAEG FLPNVERGSN GYRQYTQQHI DAIKTAHQLI 
KGYGWRNAQQ IMAALHQANH QTAFNLINQH HAKLDSIRQQ LDQTLTLLKA VADQLPPSPR
HSQRILVGEA AKAVGVPISA LRFWEQQGLL QPIRQASNNY RYYDERQLRR LRIIVLLRQA
NADFSSIRTT LETLDQQQPQ RAVAAIEQRR VALAQQSWEC LQATTALVSY IQTYVPLQPI
PIIE