Gene Haur_1700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1700 
Symbol 
ID5733584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1972591 
End bp1973436 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content50% 
IMG OID641278839 
ProductNmrA family protein 
Protein accessionYP_001544471 
Protein GI159898224 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.560345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCAA ACAATTTAAT CTTGGTCACC GGAGGCACTG GCAAAACTGG TCAGCGAATC 
GTCGCTCGTT TGCAAGCCCA AGAACTGAAC ATACGGATTG GCTCACGTTC AGCCAGCCCC
AGCTTCGATT GGCACGATCA GCAAACTTGG CCCGCAGCGT TGGCAGGAGT GCAACGTGTC
TACATCTGCT ACCAGCCTGA CCTCGCTATC CCTGCGGCCA TCGACACAAT TCGGGCATTT
TGCCAGTTGG CGGTAAACAG CGGCGTGCAA CATTTGGTAT TGCTATCGGG ACGCGGTGAA
CCAGAAGCCC AAGCCTGTGA ACAAGTGGTA CAAACCGCAG GCATAACCTG GACGATTGTC
CGAGCTGGCT GGTTTATGCA AAATTTCAGT GAATCGTTTT TTCACGAGCC ACTGCTGAAT
GGTCAGATCT TCTTACCAAC GAGCGATATC AAAGAGCCAT TTATTGATGC TGAGGATATT
GCCGATGTGG CAGTAGCAGC GTTGACCAAC ATTGAACAAC ATCAAGGCCA CGTTTACGAA
ATTACCGGGC CACGGTTAAT GACCTTCGCT GAAGCAATTA GTGAAATTGC CCAAGCCAAT
GGCAAGCCAA TCGAATATCA ACAAATTCCA CTTGAAACCT ATCTTGGAGC ACTGCGTGAA
CAACAATGGC CCAATGAGAT GCTTTGGTTA GTTGAATATT TGTTCAGCCA AGTGCTAGAT
GGTCGCAATG CCTACCTAAC TGATGGAGTC GAACGGGCTT TAGGTCGCCA ACCGAATGAT
TTCAGCAACT TTGCACGCGA GGCTGCAAAA CGGGGAGTTT GGCAGCTTAC CAGCATCAGT
CGCTAG
 
Protein sequence
MTANNLILVT GGTGKTGQRI VARLQAQELN IRIGSRSASP SFDWHDQQTW PAALAGVQRV 
YICYQPDLAI PAAIDTIRAF CQLAVNSGVQ HLVLLSGRGE PEAQACEQVV QTAGITWTIV
RAGWFMQNFS ESFFHEPLLN GQIFLPTSDI KEPFIDAEDI ADVAVAALTN IEQHQGHVYE
ITGPRLMTFA EAISEIAQAN GKPIEYQQIP LETYLGALRE QQWPNEMLWL VEYLFSQVLD
GRNAYLTDGV ERALGRQPND FSNFAREAAK RGVWQLTSIS R