| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1693 |
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| Symbol | trpA |
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| ID | 5733577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1967519 |
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| End bp | 1968334 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641278832 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001544464 |
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| Protein GI | 159898217 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000483828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCGAA TTGCCCAAAC TTTTGAACGC TTAGCCAGCC AAGGTCGGAC AGCCCTGATG
CCATTTTTGA CGATTGGCTA CCCTGAGCGT GATTCTGCCC TGAGTTTAGC CCAAGCCTTG
GTTGCTGGCG GCGCAGATAT GCTTGAGCTT GGCATGCCCT TTTCTGATCC GTTGGCCGAT
GGCGCGACGA TTCAACGTAC CACCGATATT GCCCTAACCA ATGGAGTGGA TATTGGGTTT
TGTTTGGAGA CGGTGCGCCA ATTACGAGCG ACTGGCATGA GCATTCCGTT ATTGCTGATG
GGCTATTTCA ACCCTATGTT TCAATATGGC GTTGAACGGT TTGTGGCCGA AGCTAAAGCG
GCGGGTGCTG ATGGTTTTAT CGTGCCTGAT TTACCACCTG AGGAGGCCGA CGAATTTCAT
GCTGCGGCCA AAGCCCATGA GTTGGATTTG GTGTTCTTGT TGGCTCCAAC CTCGACTGAT
GCCCGTATCG CCAAGATTGC CAGCCTGTCG TCGGGGTTTA TCTACTGTGT GGCATTGCGC
GGCGTAACTG GTGCGCGGGC TGCGTTGGCA GACGATTTGG GTGATTTCTT GGCGCGAGTA
CGCCAATATA GCCAATTGCC GCGTGCGGTT GGCTTTGGCA TCTCCAAACC TGAACATGTG
GCCGCAGTTG CCAAAATGGC TGAAGGGGCA ATTTGCGCCA GTGCCTTGCT CGATTATATT
GGCAATTTGC CCGCCGAAGA GCGTGCTACT GGAGCGCAAC AGTTTGTGCA AAGCTTGCGC
GATGCTGCTG ATCGGGCTAC GGGCTATCAA CAATAA
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| Protein sequence | MSRIAQTFER LASQGRTALM PFLTIGYPER DSALSLAQAL VAGGADMLEL GMPFSDPLAD
GATIQRTTDI ALTNGVDIGF CLETVRQLRA TGMSIPLLLM GYFNPMFQYG VERFVAEAKA
AGADGFIVPD LPPEEADEFH AAAKAHELDL VFLLAPTSTD ARIAKIASLS SGFIYCVALR
GVTGARAALA DDLGDFLARV RQYSQLPRAV GFGISKPEHV AAVAKMAEGA ICASALLDYI
GNLPAEERAT GAQQFVQSLR DAADRATGYQ Q
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