| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1679 |
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| Symbol | |
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| ID | 5733563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1948172 |
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| End bp | 1953526 |
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| Gene Length | 5355 bp |
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| Protein Length | 1784 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641278818 |
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| Product | helicase superfamily protein |
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| Protein accession | YP_001544450 |
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| Protein GI | 159898203 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAGTC CAGCATTTGT TGAACAAGAA CTCTTGGAAA TAGTAAGTGT ATCCCTTGAA
ACCGTCTATC GGCTCTCTAA TTCGAGCCTC GCCCGTGATC GGGCTGCATT AATTCGCCAA
AATGGTGTTC TTAGCCAAAA ACCCTATATT GAAACAACGC CACGCTATCA ATCAGGAATC
CACCTAGCAG ATTTTAAGCA TCCCATGGTT GGGCCTGAGT TGGCAGCACT CGTCAATTTG
GGCTTGCTGA ACCCACGCTA TCCATTGTAT GCACATCAAC AAATGGCACT TGCATCGGCT
TGGGATGCCA ATGGTTACCC ACAACATTTA ATTGTATCGA CGGGGACGGG TTCAGGGAAA
ACCGAAACCT TTTATTTGCC GATTTTAGCT GACATTCTAC GGGAAGCCCG CAGTTGGCAA
GCTAGTAAGG TTGAGCCACA ACGTGGTTTA TGGGATGGAA ACACCTGGCT GCATAGTCGT
CGCCACGAAC GACGACCTGC TGCGATTCGG GCTTTGGTTA TGTACCCAAT GAATGCCTTG
GTTAACGATC AACTAAGTCG TTTGCGTAAA GCCTTGGTCA ATGATCCTGC GCTTGATTGG
CAATCACGCC ATTTAGCAGG CAATCGAATA ACCTTTGGGC GTTATACAAG CCAAACCCCA
GTTGCCGGGG TGGCAAGCCA CCCGAAAAAG CGCGAATTGG TTGAACGCGA ATATCAGGAA
ATGGCCGAAC AATGGAAGAA TGTGGGAGCC GAACTCCAAA AAACTGGCGG TTGGCTGCGG
CCTGATAGTG CCGAAATGTG GTGTCGTTGG GATATGCAGG TTGCGCCGCC TGATATTTTA
ATTACCAACT ATTCTATGTT GGAATATATG TTGGTTCGGC CGATTGAGGC CTCGATTTGG
CAACAAACCC GCGATTGGTT GGCTGCAGAT CGCCAAAACC ATCGGTTTAC CTTGGTCTTA
GACGAAGCCC ATACCTATAG TGGAGCGCAG GGTGCTGAGG TAGCCTATTT GATTCGTCGC
TTGTGTCAAC GCTTGATGAT TGAGCCAAAT CAATTACGCT GTATTGCCAC AAGCGCAAGT
TTAGGCGAAA CACCAGCCGA TCTGGCCAAG GTTAAAGCAT TTGCTGCTGA TCTCTTTGGC
CAATCGGCAG ATCGATTTCA ACTGATTACG GCCCAAACAG AAGCACTTGC GGAACCCACG
GCTCCACCGA CAAGCCAAGA AATAGCTGCT TTTGCGAATT TTCAAGGTGC GGTTCAAGAA
CATGATTTAA CCGAGCCAAC TGTTTCGGCT ACAACCATCA AGGGTTTAAT CACCGATTTA
GGTGGCACAC TGGGCGAGGG ATGGGCTGAA GCGCAGCTGT ATCAGACGTT GCTTGAACAT
CCACGGCTCT TGGATCTACG GCGTTTGACT GCCCGTAAGG CTGTTGATTT TGATCGTTTG
GCCCGAACGA TCTGGGGTGC AGAAGCTGAC CTGACCCAAG CCCAACAGGC AACTGCTGGA
ATGTTAACAG CAGGCGTTTT AGCCAAAATG GAGCCAACCT CTGATGCGCA ACCATTATTG
CCCAGCCGGA TGCATCTAAT GTATCGTGGC TTACCTGGCC TATGGGCTTG TATGAACCCA
CAATGTAGCG AAGTAACGGA ATTGCCCTCA AGCCAACGGA TATGTGGCAA ATTATATGCT
ACCCCAACTA TTTGGTGTGG CTGTGGTTCA CGGGTTTTAG AGTTAATGTC GTGTCGGGTC
TGTGGCTTAG CCTTCTTAGG CGGAATCCCG GAAGATCCCC ATGAGCAGCG TTTGTGGCCA
TATCCTAATG ACGATTTGGA GCGGATAGTC GCCGATAGTC GTGGTTATCA AGTATTTGCC
TTGGAAAACC CTAACCCTGA TAAACAGCCT CAGGCTGATT GGCAATTAAA CTATCGCTCC
GTTAAAAGTA GTGGTCTATG CCGCGAAACG GATGCTGATG CCCGGATGGT CTGGGAACAA
ACCGAGACGA TCAAGCAAAA AAAAACCGAG AGTATGCGCT TGCCAAGAGC CTGCCCTCGT
TGTATCTATC CCTCTGATAG AGGAGTAGCC GAAGCTTTCC GTACATTAAC TCCGCAATTC
TTTGCGGTCT TGATGGAACA TGCCTTTCGG ATTCAGCCCC CTCGTGACCA AAAAAGCCAA
TCAATTCCGA CACCTATCGT TGAAAATAAA TGGAGCTTTC GGCGAGTACA ACCGACAGTG
GTGACCTCTA CCCAAAGCAA TCCGAATCGA GGTCGGAAGT TACTAACGTT TTCTGATGGC
CGACAAACGG CTGCACGCCT AGTTGGAACG CTAAATTTTC AACGAACACG TGACCTTTTT
CGTCAGATTG TGATGAAACT GCTTGATCAA CAACAGCTTA CCAACCCTGA TCAGCCATAC
GCATTAACCA ATTTACGTGA GGCAATCCTC AACTTTTGTA TTGATCATGC GATTGATCCA
ACCTTTGGGG AAAAAGATGG CTTTTGGAAT ACGCTTCAGC AAAATCGTGA AGAAGCCAAA
CGTTTAGCCC GCCCAGTGCT TGATGATTAT TTTCGGCGGG AATTGGCTGA TCGGCAGATT
GGGGTTGAGG CCTTGGGCTT AGCACGATGG GTTCCGCTCG ATAGTGCAGA AAAGGATATT
CGCCAAGATA TTCGTGAATC GGGATCAACC TTGACTGGCT TTGATACTGA GCAAACGATA
GGGATAATCA CCTCGATTGT ACGGATTTTA TTGGGCGAGA ATATGATTCT ACCGGCAAGT
GCTGATCCGC GCGATTGGGA TCAGGCATTA ATTGAGTATT GGGAACGCCG AACAGTGGTG
AATCAAGGAG CCTTAAAAAG CCCACAGACC TTGTTTTGGA ATGCGGGAGA AAACGACAAC
CGTATAACAC GTTATTTACG TGCGGTTATT GCCAGCTCAA ACCAAACTGC TGGAATTACG
CTCAGCCAAT TGATGCATGA ACTGTGGGAC GCACTGACCG GAATGGGTAT TTTGCGTCCT
GTACAAGGGG TAACTCAGCC TGGTTTTGCA ATCTCGATTG CTAGTTTAGG TTTATTACTA
TTAACCACAA CCATGTATCA ATGTCGGGCT TGTCGCTACT TGAGTGCTGA ATCGATTTTT
GGGGTTTGTT TACGCTGCCA AAATACGATG GATGAATGTA CTTTAACCGA TGTTGAACAG
CAAGAAGGCA ATTATTATCG CAAACTTGTT GATTATGCGC GTAACCAATC ATCGATGTTT
GCTGATCCGT TTCCATTGCA TGTGATGGAA CATACAGCGC AGATTAGCCG TAAACAGGCC
AGCGATCGCG AACGCCACTT TAAAGATCAA TTTATTCCGC TGTATACGCC GAGTGGTGCA
GTTAACGATC GTGGTGAGCA TCCTCAAGCC CATCGGGTTG ATATGCTGAG TGTTACCACA
ACGATGGAGA TGGGGATTGA TATTGGCGAT CTGACGGTGG TTGGTTTGCA TAATATGCCC
CCAACGGTGG CTAATTATCA ACAGCGAGCT GGACGAGCTG GTCGGCGCAG TGATGGCGTA
GCTGCGGTAC TGACCTTCGC GCGTGATCGT AGTCACGATC AATATTATTT TCGTGAAGTT
GCTCAGATTA TTACTGGCGC AGTCAAATTA CCCATTATTC CAATAGATAA TCTTGTGATT
GCCCAACGCC ATATTTATGC CTTAGTGTTA CAACAATTTT TCCATCAGAT GCAGGGTGTA
TCTGATAATT TGGGGGTATT AGGCGCGTTT GGGAGGGTTG ATCAGGCTCC TGCCATGATC
GAAAAACTCA AACAACAGTT AGCCGACCCA ACCTTTACCG ACACCATTCT ACGCTCGGCA
GCAAGTATTT TAGCGACATA CTATGACTCA GAACGTGTCC AGGCATGGCT AGAAGCATTA
CCTGATCAGA TCAGTAAGGC ACTTGAGCAA AAACGACCAG AAGAGGAACT TTTGGAAGTG
GCAATTAATG CAGGGATTTT GCCACGCTAT GCATTTCCGG TTGATATTGT GCCGCTGTAT
CGTAGTAAAC CCCAGCGTTA CATGCCTGAT GAAGATTTAA CCCGTGATTT ACAGATTGCG
CTTTCTGAAT TTGCGCCTGG CAGTGAGTTG GTGGTTGATG GAAAACAATA CCAAGTTGCT
GGCATTTATG ATCACTTTCA AAATGGTGGC TATCGGCCTC AGGGTCAATT TTATCAATGC
CCTGAATGCC GTGCAGTCCA TTATCGACCC TTCAATCAAC AGGGTGTTAT CACTGAGGCC
TTTCCAAATC CCTGTGAATC ATGTGGGACA GCGTTTCAGA AGGATGCTGT TTTGGCAGCC
ATAACCCCAA ATGGGTTTCG GACAAATTGG GGCATCAAAC CGAGCAAATA CCGTGGAGGG
CGGCAAGAGC GTTCGGGTTA TGCTTCAATG GCGCAACTTG AAATAGGTGA AGATGTTTCA
AGTGGCCGTT TAGAATATGC TGATCGCTTA TGGGTTGCTG CCCGAGAACA ATGCGATCTG
TATATGGTCA ATCGCGGCCA AACATCAAAT GATCGAGGTT TTTACATCTG CCATCGTTGT
GGTTATGGCT CGCTCACTGC CGATAAAAAA CATAAATCAC CAGAAACTAA CAACGATTGT
GGTGAAAAAC TTCAAACACC TGCTGTTCTG TTGCATAAAT TGCGAAGCGA TGTGGTGCTG
TTTGGCCTCA ATTTTCCAAG CGCCTACAAT GCTGATCCGC GCACAACTGC TGGCAGGGCT
GTTTGGCTTT CCTTTGGTTC GGCCTTATTA CGAGCGGCGG CGGCAGAATT ACAGATTAAT
CCCAGTGAAT TAGCCATGGG AATTCGGCCA TGGCGGCAGG GTTCTCAATT AAGCACCGAA
ATTTACCTCT ACGATACATT GCCAAATGGG GCTGGTTATG CCCACGCAAT TGCCCAAAAC
GACCGATTAA CTGCAATTCT CCAGCGTGCC GCTGTGTTAT GTCGAGATTG TCAATGTTCA
GGAGCATGTT ATGGGTGTCT GCTTGACTAT AATAATCAAT ATGCTCACGC ACTGTTAGAT
CGTCGGCTGG CGTATGATGT GATTCGGTTC ATCCAACATG GTGAGTTGCC AGAGCTAACA
CCGACTATGG CTGAGCGGGC GATTGATCAA CTCAAAAGTT TTGCTATTCC GTCAACGGTG
TTAGAGCAAC TTGATCCACA AACAATTCAA ATTCACTTTA CGGATCGAAG CTATACCACC
GAATTACAAC CACGCCATCC ACTTATTCGC CAGGTTAGTA CTGCAAGCAT GGCCTACCCA
ACCACGTTTG ATCTTGAACG ACGACCATTT TGGGTTTGGA CAAAACTACG CGAAGAGGAA
TTTGAGGCCT TGTAA
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| Protein sequence | MYSPAFVEQE LLEIVSVSLE TVYRLSNSSL ARDRAALIRQ NGVLSQKPYI ETTPRYQSGI
HLADFKHPMV GPELAALVNL GLLNPRYPLY AHQQMALASA WDANGYPQHL IVSTGTGSGK
TETFYLPILA DILREARSWQ ASKVEPQRGL WDGNTWLHSR RHERRPAAIR ALVMYPMNAL
VNDQLSRLRK ALVNDPALDW QSRHLAGNRI TFGRYTSQTP VAGVASHPKK RELVEREYQE
MAEQWKNVGA ELQKTGGWLR PDSAEMWCRW DMQVAPPDIL ITNYSMLEYM LVRPIEASIW
QQTRDWLAAD RQNHRFTLVL DEAHTYSGAQ GAEVAYLIRR LCQRLMIEPN QLRCIATSAS
LGETPADLAK VKAFAADLFG QSADRFQLIT AQTEALAEPT APPTSQEIAA FANFQGAVQE
HDLTEPTVSA TTIKGLITDL GGTLGEGWAE AQLYQTLLEH PRLLDLRRLT ARKAVDFDRL
ARTIWGAEAD LTQAQQATAG MLTAGVLAKM EPTSDAQPLL PSRMHLMYRG LPGLWACMNP
QCSEVTELPS SQRICGKLYA TPTIWCGCGS RVLELMSCRV CGLAFLGGIP EDPHEQRLWP
YPNDDLERIV ADSRGYQVFA LENPNPDKQP QADWQLNYRS VKSSGLCRET DADARMVWEQ
TETIKQKKTE SMRLPRACPR CIYPSDRGVA EAFRTLTPQF FAVLMEHAFR IQPPRDQKSQ
SIPTPIVENK WSFRRVQPTV VTSTQSNPNR GRKLLTFSDG RQTAARLVGT LNFQRTRDLF
RQIVMKLLDQ QQLTNPDQPY ALTNLREAIL NFCIDHAIDP TFGEKDGFWN TLQQNREEAK
RLARPVLDDY FRRELADRQI GVEALGLARW VPLDSAEKDI RQDIRESGST LTGFDTEQTI
GIITSIVRIL LGENMILPAS ADPRDWDQAL IEYWERRTVV NQGALKSPQT LFWNAGENDN
RITRYLRAVI ASSNQTAGIT LSQLMHELWD ALTGMGILRP VQGVTQPGFA ISIASLGLLL
LTTTMYQCRA CRYLSAESIF GVCLRCQNTM DECTLTDVEQ QEGNYYRKLV DYARNQSSMF
ADPFPLHVME HTAQISRKQA SDRERHFKDQ FIPLYTPSGA VNDRGEHPQA HRVDMLSVTT
TMEMGIDIGD LTVVGLHNMP PTVANYQQRA GRAGRRSDGV AAVLTFARDR SHDQYYFREV
AQIITGAVKL PIIPIDNLVI AQRHIYALVL QQFFHQMQGV SDNLGVLGAF GRVDQAPAMI
EKLKQQLADP TFTDTILRSA ASILATYYDS ERVQAWLEAL PDQISKALEQ KRPEEELLEV
AINAGILPRY AFPVDIVPLY RSKPQRYMPD EDLTRDLQIA LSEFAPGSEL VVDGKQYQVA
GIYDHFQNGG YRPQGQFYQC PECRAVHYRP FNQQGVITEA FPNPCESCGT AFQKDAVLAA
ITPNGFRTNW GIKPSKYRGG RQERSGYASM AQLEIGEDVS SGRLEYADRL WVAAREQCDL
YMVNRGQTSN DRGFYICHRC GYGSLTADKK HKSPETNNDC GEKLQTPAVL LHKLRSDVVL
FGLNFPSAYN ADPRTTAGRA VWLSFGSALL RAAAAELQIN PSELAMGIRP WRQGSQLSTE
IYLYDTLPNG AGYAHAIAQN DRLTAILQRA AVLCRDCQCS GACYGCLLDY NNQYAHALLD
RRLAYDVIRF IQHGELPELT PTMAERAIDQ LKSFAIPSTV LEQLDPQTIQ IHFTDRSYTT
ELQPRHPLIR QVSTASMAYP TTFDLERRPF WVWTKLREEE FEAL
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