| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1675 |
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| Symbol | lysS |
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| ID | 5733559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1940893 |
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| End bp | 1942371 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641278814 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001544446 |
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| Protein GI | 159898199 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.100386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAA ACGATTTACA GCAAACACGC TATGGCAAGC TACAGGCGCT GCAAGCCGCT
GGCATCGAGC CATATCCAGC CCGAGTGCCG CAACGCACTC ATACATTAAC CGCCGTGCGT
GAGCAATTTT CGGCCCTGGT TGAGGCCAAT GCCACGGTAA CAATTATGGG GCGCTTGCGC
CAACGTCGCG TTATGGGCAA ATCAGCGTTC GCCCATTTAA ATGATGATCA TGGCGCGTTT
CAAATTTTCC TCAGCAAAGC CGATGTTGGC GATGAGCCAT TCAAGCATTT TGTTGATCTG
ACTGATCTTG GCGATATTAT TGCGGTCACA GGCACGCTCT TTACGACCAA AATGGGCGAA
CCAAGCGTAC ATGTCACCAG CTGGACGATG CTCAGCAAGG CGATCACGCC GCCACCCGAC
AAACGCGAAG GTCAATTTAG CGACCAAGAA GCTCGCCAAC GCCAACGCTA TGTTGACTTA
TCCGCCAATC CTGAAGTTCG CGAAATCTTC CGGATTCGCG CTCGTTTGAT CACGGCAATG
CGGCGCTACC TCGATGAACG CGGCTTTTTG GAAGTTGAAA CGCCAGTATT GCAGGGGATT
TATGGTGGCG CAGCGGCGCG ACCATTCACC ACCCATCATA ATCAATTGCA CCAAGATTTA
TACCTGCGGA TCGCCACCGA GCTCTATTTG AAGCGCTTGA TCGTTGGCGG CTTCGATGGT
GTGTATGAAA TTGGCAAAAA CTTCCGCAAC GAAGGCGTTG ATCGCACCCA TAACCCCGAA
TTTACCATGA TCGAGGTCTA TCAAGCCTAC GGCGATTATG AATCGATTAT GCAATTAACC
GAGGGCATGA TTCGCTTCGC TGCTGAGCAA ATTTTTAACA GCACCAGCAT CGAATACCAA
GGGCATCAGA TCGAGCTTGG CGGTTCGTGG CAGCGCTTGA CCATGCGCGA TGCCATTTTT
GAAAAAACCG GGGTTGATAT TCGCGAGTGC CGCGAATTTG ATACACTATG GGAAGCAATT
GGCGAAGCTG GCCTGAAAAT TGAGCGCAAG CCAACCTGGG CCAAGCAAGT TGATGAGCTA
TTTAGTGAGT TTGTTGAGCC TGAGTTGATT CAGCCAACCT TTATCACCGA ATACCCTCAG
CCACTTTCGC CTTTGGCCAA GCGCAAAGCC GATGATCCAC AGTTTGTCGA GCGCTTTGAG
CTATTTATGC TTGGAGCCGA AATTGCCAAC GCCTTCAGCG AATTAAACGA TCCCTTCGAT
CAAGAGCAAC GCTTCTTGGA GCAAGGCCGC GATTATGCTG CTGGCGATGA CGAAGCCATG
CAAATGGACG AAGATTACCT TGAGGCGCTT AAAGTTGGTA TGCCACCAAC TGGCGGTTTA
GGCATCGGGA TCGATCGGCT ATGTCTGTTA TTTACCAATC AAACTACGAT TCGTGAAGTA
ATCTTCTTCC CGCATTTGCG CAAGCAGGGC GAGGAGTAG
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| Protein sequence | MELNDLQQTR YGKLQALQAA GIEPYPARVP QRTHTLTAVR EQFSALVEAN ATVTIMGRLR
QRRVMGKSAF AHLNDDHGAF QIFLSKADVG DEPFKHFVDL TDLGDIIAVT GTLFTTKMGE
PSVHVTSWTM LSKAITPPPD KREGQFSDQE ARQRQRYVDL SANPEVREIF RIRARLITAM
RRYLDERGFL EVETPVLQGI YGGAAARPFT THHNQLHQDL YLRIATELYL KRLIVGGFDG
VYEIGKNFRN EGVDRTHNPE FTMIEVYQAY GDYESIMQLT EGMIRFAAEQ IFNSTSIEYQ
GHQIELGGSW QRLTMRDAIF EKTGVDIREC REFDTLWEAI GEAGLKIERK PTWAKQVDEL
FSEFVEPELI QPTFITEYPQ PLSPLAKRKA DDPQFVERFE LFMLGAEIAN AFSELNDPFD
QEQRFLEQGR DYAAGDDEAM QMDEDYLEAL KVGMPPTGGL GIGIDRLCLL FTNQTTIREV
IFFPHLRKQG EE
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