| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1664 |
|---|
| Symbol | |
|---|
| ID | 5733548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 1932217 |
|---|
| End bp | 1933113 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641278803 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001544435 |
|---|
| Protein GI | 159898188 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACGC ATGCCGTCGA GCTACACAAG GTTGGTAAAC GCTATAAATA TTTCAGCTTA
AACGATATTT CGTTGAGCCT ACCAACTGGC AGTATCACCG GATTTATTGG AGTCAACGGT
GCAGGCAAAT CAACCACGAT TCGCATTTTA TTAGGCCTTG TGCATCAAGA TCATGGTTCG
GTGCAGGTTT TGGGTCAAGC CATGCCGGAG CAACAAGTGC TGGCCAAACG CGAGATTGGC
TATGTTTCCG AGGATATGCG CTTGTATCCC AAGGCTAGTT TGGCTTGGCA TATGCAATTT
ATCCAGTCGA TTTACCCAAA TTGGGATCAA GCCTATGCTG AGCAATTGCT CAAACGTTTC
GACCTGCGTG CTGAACAGAA GATTAAAGGC CTATCGCATG GTCAGCGCGT CAAAGCGAGC
TTACTGTTGG CCTTAGCACG CCGACCCAAA TTGCTGATTC TCGATGAACC GACGACTGGG
CTTGATCCGG TGGCACGCCA AGAAGTGCTC ACCGCATTGA TCGAAGTGTT AGCCGATGAA
GATCGCACAA TTTTATTTTC ATCGCACAAC ACGCTTGATG TTGAGCAAAT TTCCGATCAA
GTTGTGTTTA TTGATCAAGG TTCAATTATC GAAGCACGTT CAAAAGAAGA TTTGCTTGAT
GCTTGGCGGC GCTTGCGTGT GCGCGTTGCG CCAGATCAAA CGGTTGCCCA ATTGCCATAT
GTCCTGCAAC ACCAAGGCCA TGGCCAACTC CAAACAATTA TTACCAATCG GTATAGCCCT
GAATTGCAGC AAACCTATCA ACAAGCAGGC CTAGAAATTC AGGCAGTCGA ATTATTAACC
CTCGAAGAAA TTTTTGTTGC CTCGATTCAA GCGCGGCGCG AAGGAAAAAA TCTATGA
|
|---|
| Protein sequence | MNTHAVELHK VGKRYKYFSL NDISLSLPTG SITGFIGVNG AGKSTTIRIL LGLVHQDHGS
VQVLGQAMPE QQVLAKREIG YVSEDMRLYP KASLAWHMQF IQSIYPNWDQ AYAEQLLKRF
DLRAEQKIKG LSHGQRVKAS LLLALARRPK LLILDEPTTG LDPVARQEVL TALIEVLADE
DRTILFSSHN TLDVEQISDQ VVFIDQGSII EARSKEDLLD AWRRLRVRVA PDQTVAQLPY
VLQHQGHGQL QTIITNRYSP ELQQTYQQAG LEIQAVELLT LEEIFVASIQ ARREGKNL
|
|---|
| |