| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1644 |
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| Symbol | |
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| ID | 5733528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1901574 |
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| End bp | 1902242 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641278783 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001544415 |
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| Protein GI | 159898168 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAGC CATGGGAAAT TGATGCCACC TACTATCAAG AGGAATCAGA GTTGATTCAG
GCCTTGCGGC GGCGTGAGCG CATGGCTTGT ACTTGCCTGC TAAAACGCTA TGCTTCACGT
TTGTATCATG TGGCCCTCCG CATGGTCGGT GATGCCGATG AAGCCGAAGA TGTAATTCAA
GAGAGCTTTA TTGAAGCCTG TCGTAAAATC GAGCAATATC GTGGTGATGG TGCCTTGGGC
GCGTGGCTCC AACGAATTGT AGTCAATGCC TGTTTTATGC GGTTGCGGCG TAAGCGAGCA
CAAACCGTGC CAATCGACGA GCAGTTTGAT TTGGAGAGTG CCAGCCCACG GCCTGAATTA
TGGGTTTTGG ATCGCGAGTT GAGTGCTGAA TTACGCAGCG CGATCGAGCA ATTGCCCGAA
AGCTTGCGGA CGGCCTTGAT TGCCCGTGAT ATTGAGCATT ACAGCACCGA GGAAGCCGCC
AATTTATTGC AGATAACACC CTCGGCATTG AAAGTGCGGT TACATCGAGC GCGTGCGGCC
TTGCGCGACA TTTTGGCTCA AGGCAGCGAA ACGGCTGAGC CAGCGATCGA TCATCTGACT
GATCAGATGT TGGAAACACT ATGCACCGCT GAACCTAGCC CGTCAATAGC CCGCCAGTCA
TCGAAATAG
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| Protein sequence | MQKPWEIDAT YYQEESELIQ ALRRRERMAC TCLLKRYASR LYHVALRMVG DADEAEDVIQ
ESFIEACRKI EQYRGDGALG AWLQRIVVNA CFMRLRRKRA QTVPIDEQFD LESASPRPEL
WVLDRELSAE LRSAIEQLPE SLRTALIARD IEHYSTEEAA NLLQITPSAL KVRLHRARAA
LRDILAQGSE TAEPAIDHLT DQMLETLCTA EPSPSIARQS SK
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