Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1636 |
Symbol | |
ID | 5736872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 1893107 |
End bp | 1893694 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641278775 |
Product | 2'-5' RNA ligase |
Protein accession | YP_001544407 |
Protein GI | 159898160 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGC AATGGCGGTG TTTTATGGCG CTCGATTTGC CCGAGCCAAT TCAGGCGCAA CTCTTGGCGA TCCAAGCCGA ATTACAGCAA TTGGGCTTGC CAATTCGTTG GAGCAAGCCC GAAAATCTGC ATTTAACCTT GCAATTTTTG GGCAATCTAG CGGTTGAATT ATTGCCCGAT TTACAAACCA AGCTAAATCA TGCCCTCACA CAGCAAACTG CACCAACCCT CAATTGCAAT ACATGGGGTT ATTTTCCCAA TGCCAGCCAA CCGCAAGTCG TCTGGGCAGG TTTTGAGCAA TGGCCCAACG ATTTGCTGCA ACTTCAACAA GCAGTCGTTG GGTGCAGCAG CCACATTGGC ATCATTGCCG AAACCCGCCC ATGGCATCCC CACATCACCT TGGGCTACAG CAAAGAGCGT TTAACCAAAC ACCAAATTGA ACAATTATCA AGCCAATTGC AAGCCAGCCA ATGGCCAGCA ACACCAGCGA TCTACCCAAC TTGTCAACTT ATACGCAGCA TAAGCCAACC TCAAGCCAGC AGCTACCAAA CTTTAGTGAC ATGGCAGCTT AACCAAGCAT CAACCTAA
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Protein sequence | MSEQWRCFMA LDLPEPIQAQ LLAIQAELQQ LGLPIRWSKP ENLHLTLQFL GNLAVELLPD LQTKLNHALT QQTAPTLNCN TWGYFPNASQ PQVVWAGFEQ WPNDLLQLQQ AVVGCSSHIG IIAETRPWHP HITLGYSKER LTKHQIEQLS SQLQASQWPA TPAIYPTCQL IRSISQPQAS SYQTLVTWQL NQAST
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