Gene Haur_1636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1636 
Symbol 
ID5736872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1893107 
End bp1893694 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content49% 
IMG OID641278775 
Product2'-5' RNA ligase 
Protein accessionYP_001544407 
Protein GI159898160 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGC AATGGCGGTG TTTTATGGCG CTCGATTTGC CCGAGCCAAT TCAGGCGCAA 
CTCTTGGCGA TCCAAGCCGA ATTACAGCAA TTGGGCTTGC CAATTCGTTG GAGCAAGCCC
GAAAATCTGC ATTTAACCTT GCAATTTTTG GGCAATCTAG CGGTTGAATT ATTGCCCGAT
TTACAAACCA AGCTAAATCA TGCCCTCACA CAGCAAACTG CACCAACCCT CAATTGCAAT
ACATGGGGTT ATTTTCCCAA TGCCAGCCAA CCGCAAGTCG TCTGGGCAGG TTTTGAGCAA
TGGCCCAACG ATTTGCTGCA ACTTCAACAA GCAGTCGTTG GGTGCAGCAG CCACATTGGC
ATCATTGCCG AAACCCGCCC ATGGCATCCC CACATCACCT TGGGCTACAG CAAAGAGCGT
TTAACCAAAC ACCAAATTGA ACAATTATCA AGCCAATTGC AAGCCAGCCA ATGGCCAGCA
ACACCAGCGA TCTACCCAAC TTGTCAACTT ATACGCAGCA TAAGCCAACC TCAAGCCAGC
AGCTACCAAA CTTTAGTGAC ATGGCAGCTT AACCAAGCAT CAACCTAA
 
Protein sequence
MSEQWRCFMA LDLPEPIQAQ LLAIQAELQQ LGLPIRWSKP ENLHLTLQFL GNLAVELLPD 
LQTKLNHALT QQTAPTLNCN TWGYFPNASQ PQVVWAGFEQ WPNDLLQLQQ AVVGCSSHIG
IIAETRPWHP HITLGYSKER LTKHQIEQLS SQLQASQWPA TPAIYPTCQL IRSISQPQAS
SYQTLVTWQL NQAST