| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1620 |
|---|
| Symbol | |
|---|
| ID | 5733492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 1879619 |
|---|
| End bp | 1880113 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641278759 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_001544391 |
|---|
| Protein GI | 159898144 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTTTC TAGCAGTTTT TTTTAGTGGA GGTTCAAATT CGATGGCTAA GTTTCTTGTG
GTGCGCCAAT TGCCGCGCCT CCACACCCAA GGCAGCGCCT TTGAACGCGA TTGGCAAACT
CCATGGCCGC GGAGCAGCAA CGCCCGTGTC TTGATTTGGC GACCACACGC CGATGTGCAT
GAGTATGCCG AGCAATTTGT GATCAAAGTC GAGTTGGCAG GTATGCGCGA TGCAGCAATC
GAAGTGACCT TGCATGATAG TGTCTTGTAT GTCAGTGGCC AGCGCGAGGA GCATTGCCCC
AACCACGGCG TGCATATTCA CGAATTGGGA ATTAATTATG GTCATTTTGA GCTAGAGTTT
GCCATCCGTG CGCCAATTGA CGAAGCAGCG ATTAGCGCTC GTTATGATGA TGGAATGTTG
CTGATCGCGC TGCCCAAGCG TCATCCAGCC CAAACCGAAC CACGGCGGAT CTCGATTGAA
CAAACCAACG TCTAA
|
|---|
| Protein sequence | MLFLAVFFSG GSNSMAKFLV VRQLPRLHTQ GSAFERDWQT PWPRSSNARV LIWRPHADVH
EYAEQFVIKV ELAGMRDAAI EVTLHDSVLY VSGQREEHCP NHGVHIHELG INYGHFELEF
AIRAPIDEAA ISARYDDGML LIALPKRHPA QTEPRRISIE QTNV
|
|---|
| |