| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1605 |
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| Symbol | |
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| ID | 5733507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1862688 |
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| End bp | 1864475 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641278744 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001544376 |
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| Protein GI | 159898129 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTCC GTAAACCAGG TAAGCGTTCG ATTGGCTGGC TATTGCTCTT GGTATTGATG
ATACCGTTGA TAGCTGCCTG TGGCGAAACC GCCGCTCCAA CCGCAACTGT TGGCTCAACT
CCCGCTACTG GTGGCGAACC CACTGCTGCC CCAACTACCG CTCCTACAGA TGACACCGCT
GCAGCCACAC CAACCGACGC CGCTGCTGCA ACCGAAGAAC CAACCATGGG CGATGCTGAT
AAGTATCTGG TATTTGGTGG TTCGGGCGAA CCCGATTCAC TCGATTCGAT GGATACGACC
ACGGGTACTG CCTTGATTGT AACCCGCCAA ATCCAAGAAT CGTTGTTGGG TTTCAAGGCT
GGTACGTTGG AAGTTGTGCC CGAATTGGCG ACCAAGTGGG AGCCAAACGC CGATGCAACC
GAGTGGACGT TTACCCTGCG CGAAGGGGTT AAATTCTCTG ATGGCACCGA CTTCAACGCT
GATGCAGTAG TTTTCAACTT CCAGCGCTTG TTTGTGCCTG ATTTTGAGTT TGGCTTCCGT
GCCGAAGGCA AGCAATACAA CATCGTGCCC GATATTTTTG GTGGCTATGC TGGCGACCCC
AACAGTGCCT TCAAAGAAAT TATGGCAGTT GATCCAACCA CGGTTAAGTT TGTTTTGACG
CGGCCTGTGC CGTTGTTGCC AAGCTATTTG GCCGCTTCCT ACTTCGGAAT TTCATCGCCC
GAAGCAGTCA AGGCTGCCAA AGAAAAATAT GGCTCACCAG AAGTTGGTGG CGTTGGGACT
GGCCCCTTCA AGTTTGAGCG CTGGGATGCT GGTCAAAGCA TCACCTTGGT GCGCAACGAA
GATTATTGGG GCGACAAGGC CAAAATGCCA GGTGTGGTTG TGCGCTTTAT CGCCGAAGCA
CCCCAACGTT TGGCCGAGCT TGAAGCTGGC ACAATTGATT TCACAATCAA CTTGAGCGCT
GATAGCCGCG ATAAAATTGC TTCAAGCGCC GATTTGCAAG TGGTTGATTT GACTCCATTC
AACATTGCCT ACTTGTCGTT GAACATGAAC AACAAGCCTT TTGACGATGT GCGGGTTCGT
CAGGCGGTTG CCTATGCCAT CAACAAGCAA GAAATTCTTG ATGCCTCGTA TGGCGGCGTT
GGCTCAATTG CCGACGACTT CTTGCCCGAT GGATTGGCTG AATATCGGGC GACTGACCTC
GAACCATATG CTTATGATCC AGAAAAAGCC AAAGCCTTGT TGGCCGAAGC TGGCTATGCC
GATGGCTTTA GCACCATGGT CTTGACCGAT GGAACTGAAT TGCCCTTGGA ATTGTGGTAT
ATGCCGGTTT CACGGCCTTA CTACCCCGAT GCTAAGTCAG TGGCTGAACT CTACGCCGCC
CAACTTTCCG ACGTTGGGAT CAAGGTTGAA CTCAAGACCG AAGATTGGGG CGTGTATCTC
GATAACTGGG ATGCTGGCCT GAAAAACGGG ATGGTGATGT TGGGTTGGAC GGGCGACTAT
GGCGACCCTA ACAACTTCTT GTTCACTCAC TTTGGCCCAG GCAACGCCGA CGAAGCTGGT
TATACTAACG AGAAAGTTTG GCAATTGCTG GCCGATGCTG GTGGCGCTTC CTCGCCCGCC
GAGTCAATTC GGCTGTTCCA AGAAGCTGGC AAGTTGATTA ACACCGATTT GCCACGGATT
CCGATCGTGC ATGCTCCACC CGTATTGGCT GCTAAAAAAG CCTTGCAAGG CTGGGTGCCA
AATCCAACTG GTGGCGAATC ATTCGCACCG ATCTCAATCA CGAAATAA
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| Protein sequence | MSFRKPGKRS IGWLLLLVLM IPLIAACGET AAPTATVGST PATGGEPTAA PTTAPTDDTA
AATPTDAAAA TEEPTMGDAD KYLVFGGSGE PDSLDSMDTT TGTALIVTRQ IQESLLGFKA
GTLEVVPELA TKWEPNADAT EWTFTLREGV KFSDGTDFNA DAVVFNFQRL FVPDFEFGFR
AEGKQYNIVP DIFGGYAGDP NSAFKEIMAV DPTTVKFVLT RPVPLLPSYL AASYFGISSP
EAVKAAKEKY GSPEVGGVGT GPFKFERWDA GQSITLVRNE DYWGDKAKMP GVVVRFIAEA
PQRLAELEAG TIDFTINLSA DSRDKIASSA DLQVVDLTPF NIAYLSLNMN NKPFDDVRVR
QAVAYAINKQ EILDASYGGV GSIADDFLPD GLAEYRATDL EPYAYDPEKA KALLAEAGYA
DGFSTMVLTD GTELPLELWY MPVSRPYYPD AKSVAELYAA QLSDVGIKVE LKTEDWGVYL
DNWDAGLKNG MVMLGWTGDY GDPNNFLFTH FGPGNADEAG YTNEKVWQLL ADAGGASSPA
ESIRLFQEAG KLINTDLPRI PIVHAPPVLA AKKALQGWVP NPTGGESFAP ISITK
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