Gene Haur_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1603 
Symbol 
ID5733490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp1860437 
End bp1861114 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content54% 
IMG OID641278742 
ProductABC transporter related 
Protein accessionYP_001544374 
Protein GI159898127 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGTT TGAGCGATAT TCACAAAACC TACCAAATGG GTGATGTGCT GGTGGCAGCG 
CTGCAAGGCG TGAGTTTCAG CATCGACAAG GGCGATTTTG TAGCGATTAT GGGGCCAAGC 
GGGAGCGGCA AAAGCACAGT GATGAACTTG ATCGGCTGTT TGGATACGCC AACTTCAGGA 
ACCTATGTGC TTGATGGCGT GGCAGTTGAT CAGCTTTCGA GCAACGATTT GGCGCTGGTG 
CGTGGGCAAA AATTGGGTTT TATTTTTCAA CAATACAACT TGTTGCCACG CCAATCGGCT 
TTGCGCAACG TCGAAATGCC GATGATTTAT CGTGGGGTTG CGGGCACTGA ACGCCAACGC 
CGCGCTATGG CCGCCCTGAA TTTGGTAGGC ATGGGCCAGC GGGTCGATCA CCGCCCCAAC 
GAATTGAGCG GCGGTCAACA ACAACGGGTG GCGATTGCCC GTGCTTTGGC TGGCAGCCCC 
TCGGTAATTT TGGCCGACGA GCCAACTGGC GCATTGGATA GCAAAACCAG CATCGAAATT 
ATGGAATTGC TGCGGCGCTT GAATCGTGAG CAAGGCATTA CGGTGGTGCT GGTGACCCAC 
GAACATGACG TGGCGGCCTA TGCGGCGCGA GTGCTGACCA TGCGCGATGG GCAGTTGATT 
GGCGATCAGC GTAATTAA
 
Protein sequence
MISLSDIHKT YQMGDVLVAA LQGVSFSIDK GDFVAIMGPS GSGKSTVMNL IGCLDTPTSG 
TYVLDGVAVD QLSSNDLALV RGQKLGFIFQ QYNLLPRQSA LRNVEMPMIY RGVAGTERQR 
RAMAALNLVG MGQRVDHRPN ELSGGQQQRV AIARALAGSP SVILADEPTG ALDSKTSIEI 
MELLRRLNRE QGITVVLVTH EHDVAAYAAR VLTMRDGQLI GDQRN