| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1602 |
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| Symbol | |
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| ID | 5733489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1858512 |
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| End bp | 1860437 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641278741 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001544373 |
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| Protein GI | 159898126 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[V] Defense mechanisms |
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| COG ID | [COG0845] Membrane-fusion protein
[COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAA GCTCAGCACA GCCCAAAAAA CGTGGCTATA AATGGTTTGT TATTGGCGGC
GCGGTCTTAT TAGCGCTGGT GTTAATGCCG TTTGTCTTTG GTGGCGATGA TCCATCGACC
GTCTCGGCCA GCACTACCAC GACGATTCAG CGCGGTCGTT TGGTTTCATC GGTGCTTGGC
AGCGGAACGA TTAACCCCAA GCAAAGCCTT GATCTTACCT TTCAAACGAC TGGAATTGTC
AGCACCGTCT TGGTCAGCGA AGGCCAACAG GTGGTAGCAG GCCAGATGCT GGCTGAGCTT
GATGATCGTA ATTTGGCATT AAGCGTGCTT TCCGCTGAAG CCAATTTGCA AAGTGCCCAA
GCCCGTTTGC GCCAAACCCA AGAGGGCAAT GCTCGCCCAG AGGATTTGGC CGCTTCGCAA
GCCAGCGTTG ATAATGCGAA GGCCAATTTG CAAAAGACCG TAACTGGCAA TGCTACCGCT
GCTGATATTG CCTCGGCCCA AGCCAGTGTT GCTAACGCCG AAGCCCAATT ACGCAAAGCC
AAAAATGGCA CCGCTACGCC AGCTGATTTG GCCAATGCCG AAGCCTCAGT CCGTTCAGCC
CAAGCCAAGC TTGATGATCT GCGGGCTGGC CCCAAACCAG AAAAGGTTTC CAGCGCCCAA
GCCACGCTTG ATCAGGCTAA ATCAAGCTTA GAGCAAGTGA AATCTGATGC TTCGAAGGCC
AAAAATCAAG CCTCACTTGA TCGTGATACC GCCGCCAATG CGGTGCGTAA CGCCCAAACC
AGCCTCAGCC AAGTGTATTG GGAAACCCAC GATGCTGATG GGAATTGGAA GAAAAAGCCC
GATGATTTTG GCTATCAAAC CGATGTGGAT CGCTATAACA ATGCCGTGCG CGATGAACAA
GATGCCCAAA CCAAGCTCGA CGCGGCCCAA TTGGCCTATG ACAATGCCGT AACCCAAGAA
GGTTTGGATA TTGCTAATGC TGAGGCCAAA GTGCGTGATG CTGAAGTGCA ATTGCAAACT
GTGCTCAAAG GTGCAACCGC GCTCGAAATT ACCCAAGCTG AGGCCGCGCT CGACCAAGCC
AAAGCTAACC TCGATAAACT CAAACAAGGC GGAACCGCTG ATGATGTCGC GGCAGCCCAA
GCCAACCTCG ACCAAGCTAA AGCCAATTTG CGCAAATTGA CCCAAGGTGG CACGGCGGCT
GATGTTGCGG CAGCCCGAGC CAATGTTGAT CAAGCCGAAG CCAACCTTGA TAAATTAACA
GCCCCACCAA CTGATACTGA TTTGGCGATT CAAGAAGCAG CAGTTTCACA AAGCGAGCAA
TCGTTAAAAC AAGCGCAATT ACAACGTGAT AATGCGACCT TGCGTGCTCC TTTTGCTGGC
GTGATTACCT CGGTTTCGAT TGTGCCTGGT GGCCCTTCGA GCGGTGCGGT GATGCATATT
CTTGATCGTA GTGGCTTGTA TGTAGAGCTG AATTTGAGCG AAACTGATGT GGCATTAGTT
ACGCTGAATC AAAAAGTTGA GTTAACGATT GATGCGCTCG ATGCCTGGAG CGCCGAGGGT
ACGGTCAGTT ATATCTCGCC GGTGGCCGAA GTATCGAACG GCGTGGTGAT TTATCGGGTC
AAAATTAGCG TGCCTAGCAA CGACCCAATG GTTAAAGTTG GCATGACCGT CAACACCAAC
ATTATTCTCA GCGAAAAAAG TGATGTATTG CTGGTGCCAA ATTCAGCCTT GTTGCCCAAA
GGTAGCGGAC GGGTGGTGCA AGTGCCCGAT GGCGCTGGTG TACGTGAGGT CGATGTGGTG
ACTGGCATCA GCGATGGCTC ATTTACCGAA GTGTTGAGTG GCTTGAATGA AGGCGATACG
ATCATCGCCG TGCCAACTGC CGCCTCGGAT AGTGGCAATG GTGGGTTATT CGGCGGAGGC
CGCTGA
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| Protein sequence | MAESSAQPKK RGYKWFVIGG AVLLALVLMP FVFGGDDPST VSASTTTTIQ RGRLVSSVLG
SGTINPKQSL DLTFQTTGIV STVLVSEGQQ VVAGQMLAEL DDRNLALSVL SAEANLQSAQ
ARLRQTQEGN ARPEDLAASQ ASVDNAKANL QKTVTGNATA ADIASAQASV ANAEAQLRKA
KNGTATPADL ANAEASVRSA QAKLDDLRAG PKPEKVSSAQ ATLDQAKSSL EQVKSDASKA
KNQASLDRDT AANAVRNAQT SLSQVYWETH DADGNWKKKP DDFGYQTDVD RYNNAVRDEQ
DAQTKLDAAQ LAYDNAVTQE GLDIANAEAK VRDAEVQLQT VLKGATALEI TQAEAALDQA
KANLDKLKQG GTADDVAAAQ ANLDQAKANL RKLTQGGTAA DVAAARANVD QAEANLDKLT
APPTDTDLAI QEAAVSQSEQ SLKQAQLQRD NATLRAPFAG VITSVSIVPG GPSSGAVMHI
LDRSGLYVEL NLSETDVALV TLNQKVELTI DALDAWSAEG TVSYISPVAE VSNGVVIYRV
KISVPSNDPM VKVGMTVNTN IILSEKSDVL LVPNSALLPK GSGRVVQVPD GAGVREVDVV
TGISDGSFTE VLSGLNEGDT IIAVPTAASD SGNGGLFGGG R
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