Gene Haur_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1580 
Symbol 
ID5733467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp1836819 
End bp1837433 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content48% 
IMG OID641278719 
Producthypothetical protein 
Protein accessionYP_001544351 
Protein GI159898104 
COG category[S] Function unknown 
COG ID[COG4430] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0912929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACGT CAGTTTTTTT AACGGAGTGT GTGATGAGCG AACAACCAAA AGCCGAATTA 
CCAACGCTTA GTTTTGTTGA TCAAGCGGCA TGGCGCGAAT GGCTCGATGC TGAACATGCC 
ACCAGCAAGG GCATTTGGCT TAAAATGGCC AAAAAAGCCA CGGGCATTGC TTCAATTAAT 
TATGCCGAAG CGCTCGATGT GGCCTTGTGC TATGGCTGGA TCGACGGCCA AAAAAAGAGT 
TTTGATGAGC AAGCTTGGTT GCAAAAATTT ACGCCGCGTG GCAAAAAAAG CATTTGGTCA 
AACGTTAATC GCGGCCATAT CGAACGTTTA ACTGCTGCTG GCTTGATGCA ATCCGCTGGC 
GAGGCCGAAG TTGCACGCGC CAAAGCCGAT GGTCGTTGGG ATGCTGCCTA TGATTCACAG 
AAGAATGCGA CGATTCCCGA GGATTTTCAA GCTGCCCTCG ATGCTAGCCC AACCGCTGCT 
AGTTTTTTTG CCACGCTCAA GCAAGCCCAA CGCTACTCAT TTTTGTTCCG CATCCAAACT 
GCCAAAAAGC CTGAAACTCG CAGCAAACGC ATTCAAGAAT TTGTATCCTT GCTCGAACGC 
GGTGAAACCT TATAA
 
Protein sequence
MNTSVFLTEC VMSEQPKAEL PTLSFVDQAA WREWLDAEHA TSKGIWLKMA KKATGIASIN 
YAEALDVALC YGWIDGQKKS FDEQAWLQKF TPRGKKSIWS NVNRGHIERL TAAGLMQSAG 
EAEVARAKAD GRWDAAYDSQ KNATIPEDFQ AALDASPTAA SFFATLKQAQ RYSFLFRIQT 
AKKPETRSKR IQEFVSLLER GETL