Gene Haur_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1568 
Symbol 
ID5733455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1819874 
End bp1820866 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content50% 
IMG OID641278707 
Productpyridoxal-5'-phosphate-dependent protein beta subunit 
Protein accessionYP_001544339 
Protein GI159898092 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCAGAC CACGTGGTCA CTGTGGCGTT ATAAATTTAC CAGCCGTCTC AAGCATTATC 
TCATTAGGCG AAGGTTGTAC TCCACTGACC AAGGTCAAGG TTGGTCGGCA TAGCTTTCTT
GCGAAACTTG AATTTCTTAA TCCAACTGGT TCGTATAAAG ATCGTGGTGT GTCGGTAATG
ATGAGTCATA TCTTGAGTCA TCAGGTTCGG CAAGTGATTG ACGACTCTTC TGGCAATGCT
GGTGCTTCTA TCTCGGCCTA TGCGGCTCAT GCCGGTATCC AAGCACGGAT TTTTGTGCCG
GCCCATGCTA GTAGTTATAA AAAACAGCAA ATTCAACGGT TTAATGCCAC TTTAGTTGAA
GTTGAAGGGT TACGGAGCGC GACGACCACC GCCTGTTGGA AGGAAGCTCA GCATACAACC
TATGCCAGCC ATGCTTGGAG TCCTTTTTTT CTGGCGGGCC AAATGACCTG TGCTTGGGAG
ATGTGGGAAC AACTTGGGAG GCGAGTACCC GCTGCCATTG TTTGTGTTGC CGGTCAAGGT
GGCCTCTTAA TTGGCTTATT GCAGGGATTT AAGGCCTTGC TAAAAGCCAA GCTGATTCCA
CACCTACCGC GATTATATGC AGTTCAGGCG CGTGCCTGTG ACCCAATTGT GCGAGCTTGG
GAGGAAAGAA AGGAGTTTCC CCAGGCTTGT GTTGAACAGA CAACCTTGGC CGAAGGAATT
CGGATTGCCC AACCAGTTCG TGGCCGCGAT ATTCTCCGCG CGATCTACGA ATCAGCAGGT
GCGGCTATTC GGGTAGAGGA ACACGAAATT CTCGCTGCTC AAGCGATGTT GGCCCACCAA
GGTTTATTAG TCGAGGCCAC CAGTGCTGCT GCGGTCGCTG GATTATCCCA AATTTGCCAA
TTAACCGAGC TTGCGCCCGA CGATATTGTT ATTCCGTTGA CTGGCAGTGG CCTTAAACAA
GCCGCTGTAG CCGAATTAAG CATGAGGAGT TAA
 
Protein sequence
MIRPRGHCGV INLPAVSSII SLGEGCTPLT KVKVGRHSFL AKLEFLNPTG SYKDRGVSVM 
MSHILSHQVR QVIDDSSGNA GASISAYAAH AGIQARIFVP AHASSYKKQQ IQRFNATLVE
VEGLRSATTT ACWKEAQHTT YASHAWSPFF LAGQMTCAWE MWEQLGRRVP AAIVCVAGQG
GLLIGLLQGF KALLKAKLIP HLPRLYAVQA RACDPIVRAW EERKEFPQAC VEQTTLAEGI
RIAQPVRGRD ILRAIYESAG AAIRVEEHEI LAAQAMLAHQ GLLVEATSAA AVAGLSQICQ
LTELAPDDIV IPLTGSGLKQ AAVAELSMRS