| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1552 |
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| Symbol | |
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| ID | 5733439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1803598 |
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| End bp | 1804344 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641278691 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001544323 |
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| Protein GI | 159898076 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTTTG ATCATGCCCG ATTGTTGGAA CAGGTCGCTC AGATTCAGCA GCGAATCAGC
CAAGCCGCCC AGCGTAGCCA CCGTGATCCA GCCAGCGTGC GCTTGATTGC GGTCACCAAA
ACCCATCCCA TGCTGCGGAT CAATGCGGTC TTGGCGGCAG GCATTCACGA TCTTGGTGAA
AATCGGGTGC AAGAAGCCGA AGAAAAAATT GCTCTGCAAA CGCCCGAAGC ACTGGCCCAA
ACCCGTTGGC ATTTAATCGG CCACTTGCAA CGCAATAAAG CTCGCCGTGC TGCCAAACTT
TTTTCATTAA TTCACTCGAT CGATAGCGTT AAATTGGCCG AAATTCTCAA CCGAATTGTT
GATGAAGAAG CCAGCGTAAT TCCGCAACCC TTGCCAATTT TGCTGCAAGT CAATGTTTCC
GGTGAGCGCT CTAAAGATGG GTTTGAGCTA GCTGGTGGCG TGCACAACTC TGCATGGCTC
GATTTTGTAG GCGAAGTGCG GGCAATTGCT GAGTTGCCAT TGATCGATTT ACGTGGTTTG
ATGACGATTG CGCCCTATTC TGATGATGTT GAGGGTGTGG TGCGCCCATG CTTTCGGGCC
TTGCGCGAGG TACGCGACCA GCTTGAACAG CGGCTTGATC GTCCGTTGTC AGAGCTTTCG
ATGGGCATGA GCGGCGATTT TGAGGTTGCA ATCGAAGAAG GCTCAACGAT TGTGCGGGTT
GGCACGGCAC TGTTTGGCGC TCGCTAA
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| Protein sequence | MPFDHARLLE QVAQIQQRIS QAAQRSHRDP ASVRLIAVTK THPMLRINAV LAAGIHDLGE
NRVQEAEEKI ALQTPEALAQ TRWHLIGHLQ RNKARRAAKL FSLIHSIDSV KLAEILNRIV
DEEASVIPQP LPILLQVNVS GERSKDGFEL AGGVHNSAWL DFVGEVRAIA ELPLIDLRGL
MTIAPYSDDV EGVVRPCFRA LREVRDQLEQ RLDRPLSELS MGMSGDFEVA IEEGSTIVRV
GTALFGAR
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