| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1540 |
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| Symbol | |
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| ID | 5733427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1796278 |
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| End bp | 1796949 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641278679 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001544311 |
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| Protein GI | 159898064 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGTGCTTG TCTGCCATAT TAACCGCCCT GATGTTGAAC TACCGACTAA TCAGTCTGTG
GGCATTGATG TCGGGCTTGA ATCCTTTACC ACCCTGTCAA CAGGCGAGAA AACCGAACCA
CCGAAGTTCT ACCGCCGCAG CCAGAAGAAA CTTGCCCGCG CTCAGCGCAA GCTCTCACGC
GCTCGAAAGG GCAGTAAAAA CCGATTAAAA GCACGCAAGC GCGTTGCCAA CGTCCATCAA
AAAATCCGTA ACCAACGCGC CGATTGGCTT CACAAGCATG CGTTGGGGAT TGTTCAACGA
TTCGACATGG TGTGCATCGA AGATCTGAAT GTCAAAGGTC TCGCGAGAAC CAAACTGGCC
AAATCATTCA GTGATGCTGC CCTGAGTACC TTCATGCAAC GATTACAGGA AAAAGCAGAA
TGGTATGGAC GACGGGTGAT TAAGGTGGGA CGTTTCTACG CCTCATCAAA GACCTGCCAT
TACTGCCAAA CCAAAACCTC CTTGACGCTG GCGGATCGGG TGTGGACATG TCACACCTGT
GGCATGACTC ATGATCGCGA TATCAACGCC GCGATCAACA TCGTGCATGA AGGGCTACGC
CTGCTTGCCG TTGGGACGAC GGAAAGCCAA AACGCTGCTC GAGATGGTGT AAACCCAGCG
AAACGCTGGT AG
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| Protein sequence | MVLVCHINRP DVELPTNQSV GIDVGLESFT TLSTGEKTEP PKFYRRSQKK LARAQRKLSR
ARKGSKNRLK ARKRVANVHQ KIRNQRADWL HKHALGIVQR FDMVCIEDLN VKGLARTKLA
KSFSDAALST FMQRLQEKAE WYGRRVIKVG RFYASSKTCH YCQTKTSLTL ADRVWTCHTC
GMTHDRDINA AINIVHEGLR LLAVGTTESQ NAARDGVNPA KRW
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