Gene Haur_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1519 
Symbol 
ID5733406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1772753 
End bp1773409 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content50% 
IMG OID641278659 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001544291 
Protein GI159898044 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.161359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATC GCAGCTACAA CCAATATTGC GGGCTAGCCT ATGCCCTTGA ACTGCTCGGC 
GAACGTTGGA CGATTCTGCT CATTCGTGAG TTGGTGGCTG GGCCGCGCCG CTTTAAAGAT
TTACTGAACG GCTTGCCTGG CATTAGCACC AATCTCTTGA CTGAACGGCT TAAACATCTT
GAACTGCATG GCATGATCGT GCGCCAAGTC TTGGCTCCTC CAGCAGGATC AACGGTCTAT
GGCCTAACCG ATTTAGGCCG TGGGCTTGAG CCAACGTTGA TCGAGCTGGG CAAATGGGGC
AGCCAATTTG TGCCTGCAAG CAGCGAGCAT GTGCATATTT TGACGATTGG CTCATATGCT
TTGACCCTCA AAACTTTTTT TCGCCCCGAG TTGGCTCAAT TTCGCGCAAG TTATCAATGG
CATGTCGATG GCGAATTGCT GAGTATCACG ATTGATCATG GCCAATTACA CATTCAGCAA
GGCCCAAGCC AACAACCTGA TGCGATTATC CACACGACAA TCGAGCTTTA TTTGCAGCTC
TTGCAAGGTG CAATCAGTCC GCAACAAGCA GTTGCTCAAG GTTTGATGCA CATCCAAGGC
GATTTAGCGG CCCTCGATCG GTTCCTCGCC TGCTGTGCAA TTAATACCCC AACTTAA
 
Protein sequence
MNNRSYNQYC GLAYALELLG ERWTILLIRE LVAGPRRFKD LLNGLPGIST NLLTERLKHL 
ELHGMIVRQV LAPPAGSTVY GLTDLGRGLE PTLIELGKWG SQFVPASSEH VHILTIGSYA
LTLKTFFRPE LAQFRASYQW HVDGELLSIT IDHGQLHIQQ GPSQQPDAII HTTIELYLQL
LQGAISPQQA VAQGLMHIQG DLAALDRFLA CCAINTPT