Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1519 |
Symbol | |
ID | 5733406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 1772753 |
End bp | 1773409 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641278659 |
Product | HxlR family transcriptional regulator |
Protein accession | YP_001544291 |
Protein GI | 159898044 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.161359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATC GCAGCTACAA CCAATATTGC GGGCTAGCCT ATGCCCTTGA ACTGCTCGGC GAACGTTGGA CGATTCTGCT CATTCGTGAG TTGGTGGCTG GGCCGCGCCG CTTTAAAGAT TTACTGAACG GCTTGCCTGG CATTAGCACC AATCTCTTGA CTGAACGGCT TAAACATCTT GAACTGCATG GCATGATCGT GCGCCAAGTC TTGGCTCCTC CAGCAGGATC AACGGTCTAT GGCCTAACCG ATTTAGGCCG TGGGCTTGAG CCAACGTTGA TCGAGCTGGG CAAATGGGGC AGCCAATTTG TGCCTGCAAG CAGCGAGCAT GTGCATATTT TGACGATTGG CTCATATGCT TTGACCCTCA AAACTTTTTT TCGCCCCGAG TTGGCTCAAT TTCGCGCAAG TTATCAATGG CATGTCGATG GCGAATTGCT GAGTATCACG ATTGATCATG GCCAATTACA CATTCAGCAA GGCCCAAGCC AACAACCTGA TGCGATTATC CACACGACAA TCGAGCTTTA TTTGCAGCTC TTGCAAGGTG CAATCAGTCC GCAACAAGCA GTTGCTCAAG GTTTGATGCA CATCCAAGGC GATTTAGCGG CCCTCGATCG GTTCCTCGCC TGCTGTGCAA TTAATACCCC AACTTAA
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Protein sequence | MNNRSYNQYC GLAYALELLG ERWTILLIRE LVAGPRRFKD LLNGLPGIST NLLTERLKHL ELHGMIVRQV LAPPAGSTVY GLTDLGRGLE PTLIELGKWG SQFVPASSEH VHILTIGSYA LTLKTFFRPE LAQFRASYQW HVDGELLSIT IDHGQLHIQQ GPSQQPDAII HTTIELYLQL LQGAISPQQA VAQGLMHIQG DLAALDRFLA CCAINTPT
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