Gene Haur_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1516 
Symbol 
ID5733403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp1768777 
End bp1769418 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content46% 
IMG OID641278656 
Producthypothetical protein 
Protein accessionYP_001544288 
Protein GI159898041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000028039 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACAC CATCGAAACT GGCCTATATT CCGTTGTTTA ATCTTGTGAA ATGGTGGCAA 
GCCCTCAATA TGTTGGTTGT TGGCTCTGAT CGGCTTGGCG CAGCGATCGT TGAGGAGTAT 
CGAGCAACTG CTACCCATGA TTTTCTGCGC TATCTGCAAC ACAGTGGCTT GATCAGCGAA 
TTACGGCATA GCTGCGCTGA TCTACGCTTT TTTATTGGGC AACAGCTACC AACAGGTTTA 
GAAAAACCAA ATCCTGATTA CCATGATCTT TTGGAATTGC TTTCGACAGA GCTGGGCTAT 
TTTTGGAATG AGCATCCGCC GCAAGCGCCT CGCCCCAATC ATGCCACTCT TCCACTCTAT 
AAATTATGGC AATGGTGGCA CACGTTGACC ATGATTGTGG CAGCTTTTGA GCAATTGCCT 
GACCAGACAG AAGCCAGCGA TCAAACCTTG AATGAGCAAG GCTTGATCGA TTATTTAACC 
CAAACTGGCT TATTTTTAGC CTGTGGCCAG ATTCGCTACG ATTTAAACAT AGTGCTAGCG 
CAGCACGATT TGAGTTTTAG CAACCCATAT GAACTTGATC ATGCTGGCTT GTTTGGCCAA 
ATTGCTGTCC GTTTGGGTTA TGCTTGGCAG GCTCCGCAAT AG
 
Protein sequence
MQTPSKLAYI PLFNLVKWWQ ALNMLVVGSD RLGAAIVEEY RATATHDFLR YLQHSGLISE 
LRHSCADLRF FIGQQLPTGL EKPNPDYHDL LELLSTELGY FWNEHPPQAP RPNHATLPLY 
KLWQWWHTLT MIVAAFEQLP DQTEASDQTL NEQGLIDYLT QTGLFLACGQ IRYDLNIVLA 
QHDLSFSNPY ELDHAGLFGQ IAVRLGYAWQ APQ