| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1493 |
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| Symbol | |
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| ID | 5733378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1741948 |
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| End bp | 1742697 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641278631 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001544265 |
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| Protein GI | 159898018 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000373028 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGC CATTAGCCGG AAAAGTTGCC TTGGTCACTG GTGGTTCACG CGGAATTGGC
GCAGCCAGCG CGGTTGCCTT GGCTGAACAA GGCGCAGATG TCGCCATTAG TTATGTCGCC
TCAGCCAGCA AAGCCGAAGC CGTGGTTGAG CAATTGCAAG CCCTTGGGGT TAAAGCTGTG
GCCTTCCAAG CCGACCAAGC CGATAGCGAC CAAGTAGCCG CCTTGGTCAA TAAGGTTGTG
TCACATTTTG GCAAGCTCGA TATTTTGGTC AATAACGCTG GAGTGATTCA ATTAGCTCCA
TTGAATGATG CTAACGCCGA TTTGGAAGCC GTTGAGCATA TGTTTGCCGT GAATGTGAAG
GGTGTCGCCA GCGCAGTGCG GGCAGCAACC CCACTTTTGC AAGATGGCGG ACGAATCATT
TCGATTGGCT CAGTCTCGGC AGATACCGCT CCAATTCCTG GTTTTGGCGA CTATTCAGCG
ACCAAAGCAG CGGTCGCAGG CTATACCCGC GCATGGGCCA ATGAGCTAGG ACGACGTGGC
ATCACGGTTA ATAATATTCA GCCAGGCCCA ATCGACACCG ATATGGGACC AGGCGATGGC
CCAATGCTCG ATATGATCAC TCAAGCAATT GCGCTCAAAC GGCTTGGCAA GGCTGAAGAA
GTTGGAGCAA CCGTGGCATT TTTGGCCAGT CCTGGCGCAG CTTTTATCAC TGGCGCGACG
ATTAATGTTG ATGGCGGATT GTTGGCCTAA
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| Protein sequence | MSKPLAGKVA LVTGGSRGIG AASAVALAEQ GADVAISYVA SASKAEAVVE QLQALGVKAV
AFQADQADSD QVAALVNKVV SHFGKLDILV NNAGVIQLAP LNDANADLEA VEHMFAVNVK
GVASAVRAAT PLLQDGGRII SIGSVSADTA PIPGFGDYSA TKAAVAGYTR AWANELGRRG
ITVNNIQPGP IDTDMGPGDG PMLDMITQAI ALKRLGKAEE VGATVAFLAS PGAAFITGAT
INVDGGLLA
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