Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1489 |
Symbol | |
ID | 5733374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1737131 |
End bp | 1738528 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641278627 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001544261 |
Protein GI | 159898014 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0687129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCGAA TCTGGCAGCT GCGCCACTCG TTGGCAACCA AGCTGATCTT GGCTTTTTTG TTGGTCGGCT TAATTGGAAT TTCCTTAGTG GCGCTATTGG TGGTTGTGCG TACCCGCTCA GAGTTCAGTC GCTTTCTCTC AGAACGTGAT CGCACGGCTT TGGCGAATGC GCTCGCTGAG CATTATGCAG CAACTGGCAG TTGGCAAGGC TTGAGCCAAG CGCTTGATGC CCAACCTGGA TTAATTGAAT TGCGCCAAAA TGTGGTGTTG GTCGATGCCA ACGGTGCGAT CATCAATAGC CTGCAAGAAT CAACCGCAAC CCAAACCATG CAAGATATTT TGCGTTTTGC CGGCGAGCCA ATTGTAGTCA ATCAACAGAC GGTTGGCTAT ATGCTGCCGC ATCCGATGAC TGTGCCAAAC CCTGAATTGC CACCACCCTC GCCTGAACAA GATTTTTTGG CGCGAGTGAC GTGGGCGGCA ACCGCCAGCG CCAGCGCAGC AATTCTTTTG GCCTTGTTGA TTGGTGCATT GCTAGCCCAA ACCTTGACGC GGCCAATTCG GGCTCTGATT ACTGCTACCC ACAAATTGGC TGATGGGACA TTTGATCATC GGGTGACGGT GCAATCGCAC GATGAAGTTG GTCAATTAGC CCAATCATTT AACCAGATGA GTGCCAAATT GGCCCGTGCT AGTCAACAGC GCCAACAAAT GACCGCCGAT CTTGCCCACG ACATTCGCAC ACCGTTGAGT ATTTTACGCA GCTACACCGA AGGCCTGAAA GATCAACGTT TTGTTGGTTC GCCAACTATT TATAACGTGC TGCACGAAGA AGTTGAGCAT TTACAACGGT TGGTCGAAGA TCTGCGGGTG CTTTCGTTGG CTGATGCAGG CGAGTTAGTG CTCAATCGGC GGATGATCGA TCCGCGTGCT ATTTTAGAGC GGGTTGGTCT CGCTCATATT ATGCAGGCTG AGGCTCAAGG CATTGCGCTA ACGGTCGAAG CATCCGAGCA ATTACCTTCA ATTGATGTCG ATACTGATCG CATGACCCAA GTGCTGAACA ATTTGGTCTC GAATGCCTTG CGTTATGCCA GCGCTGGCGC GATTAGCTTG GGAGCACAGC TGCGTGGAGA TCAGGTGGTG ATCACGGTGC AGGATACGGG CAGTGGAATT GATGCCGCCG ATCTGCCGTT TATTTTTGAT CGGCTGTATC GTGCCGATAA AGCGCGGCAG CGCAACGCGA GTAGCACTTC GGGCTTGGGG TTGGCGATTG CCAAGGCGAT TGTTGAAGCT CATGCAGGCA CAATCAGCGT CGATTCTTGG GTGGGCAGCG GCACGACTTT TACGATTAGC CTACCAGTTG CAAACCCTCA CGCGCAAATT CGCCCCAAAA CTACATAG
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Protein sequence | MRRIWQLRHS LATKLILAFL LVGLIGISLV ALLVVVRTRS EFSRFLSERD RTALANALAE HYAATGSWQG LSQALDAQPG LIELRQNVVL VDANGAIINS LQESTATQTM QDILRFAGEP IVVNQQTVGY MLPHPMTVPN PELPPPSPEQ DFLARVTWAA TASASAAILL ALLIGALLAQ TLTRPIRALI TATHKLADGT FDHRVTVQSH DEVGQLAQSF NQMSAKLARA SQQRQQMTAD LAHDIRTPLS ILRSYTEGLK DQRFVGSPTI YNVLHEEVEH LQRLVEDLRV LSLADAGELV LNRRMIDPRA ILERVGLAHI MQAEAQGIAL TVEASEQLPS IDVDTDRMTQ VLNNLVSNAL RYASAGAISL GAQLRGDQVV ITVQDTGSGI DAADLPFIFD RLYRADKARQ RNASSTSGLG LAIAKAIVEA HAGTISVDSW VGSGTTFTIS LPVANPHAQI RPKTT
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