Gene Haur_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1461 
Symbol 
ID5733346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1703461 
End bp1704681 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content51% 
IMG OID641278599 
Producthypothetical protein 
Protein accessionYP_001544233 
Protein GI159897986 
COG category[R] General function prediction only 
COG ID[COG3889] Predicted solute binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000257739 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGAG TGCCAGCAAT TGATCCACGG CTCAATCTGA CCCAACGGGG CGGGGTTATC 
ACGATTGGCA ATACGCTAGG CCATGATTGT GCGGCGGGCG TTCCCGCTCC AATAGTGGGT
GCAGTTGGTA CGTGTGGTAC AAATACGAGC GATTCAGGCG TTGACATTTA TTGGCGAGCC
GATTCGCCTG CTGTCAGCCA AGCTGAAGCG AATACCAGCC TCAATAATGC CCAGGCTCGC
AGTAGTGCAA TGCTCAATAT TCCGGTCGGG GCCAGCGTAA CCCATGCCTA CCTCTATTGG
GGAGCGCGTT GGGGTGGCGT AACACCAACT GGTGCTACGC TTGAATTTAA TTGGGGCAAT
AGCCAGAACG TCACACCCAT CAGTACAGTT ATCAATCCAA ATTCATTTTA TCAAGCGGTC
GCAGATGTTA CCAGCTATGT TCAAACGCAT GGCTCCGGAG CCTATCGTGC CAGTGGCATT
CTCGCTAATC CGTTTATTAA CACCAATGAT ACTAACGCCT TTGCCGCTTG GTGGTTGGTA
GTGGTCTATG CTGATGCAAG CCAACCCAAT CGAACGATCA TTCTCCACGA TGGGCTGGAT
CAAGTATTAA TTGGCAGCTC AATTACCAAT ACATTGAGTG GATTCAATAT TCCCAGCAGC
AGCACAACCA ACCTTACGAT TGTGGGCTAC GAGGGAGATA ACTCAAGCGC CGGTGACCAA
TTGCTGTTTA ATGGTAATAG CGTTAGCAAT GCGCAAAACC CTACCGATAA TATGATGAAT
AGCACTCGTT CATATTTAGG CAACCCAGTT TCAAGCGCAG GCGATTTGCC ACAACTAACC
GGAGCAGCCA ACAGTATGGG TGGGTTTGAC CTTGATACCT TTGATGTTTC AGCATGGACT
AGCCCAGGCC AAACCACAGC TAGCATAACC ACTGGCTCCA CTAGCGATAT GTATTTCGTT
GGGGGCTTGA TTTTAGCGAT CACTTCGTTG GTTGCCGATA CTCCAACGCC CAGTAACACC
CCAACCAACA CCCCGACGAA TACTTCTACT GCAACGAACA CGCCGACCAA CACACCAACG
AATACCGCAA CCAACACGCC GACCAATACC GCGACCGCAA CGAGTAGCCC AACCAATACT
CCAACCAGCA CAGCGACCAA TACTCCCACA CCAAGCCTAT GGCGAACCTT CTTGCCAATC
GCAATTCGCT CAGCTGAATA A
 
Protein sequence
MEGVPAIDPR LNLTQRGGVI TIGNTLGHDC AAGVPAPIVG AVGTCGTNTS DSGVDIYWRA 
DSPAVSQAEA NTSLNNAQAR SSAMLNIPVG ASVTHAYLYW GARWGGVTPT GATLEFNWGN
SQNVTPISTV INPNSFYQAV ADVTSYVQTH GSGAYRASGI LANPFINTND TNAFAAWWLV
VVYADASQPN RTIILHDGLD QVLIGSSITN TLSGFNIPSS STTNLTIVGY EGDNSSAGDQ
LLFNGNSVSN AQNPTDNMMN STRSYLGNPV SSAGDLPQLT GAANSMGGFD LDTFDVSAWT
SPGQTTASIT TGSTSDMYFV GGLILAITSL VADTPTPSNT PTNTPTNTST ATNTPTNTPT
NTATNTPTNT ATATSSPTNT PTSTATNTPT PSLWRTFLPI AIRSAE