| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1450 |
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| Symbol | |
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| ID | 5733314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1683978 |
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| End bp | 1689302 |
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| Gene Length | 5325 bp |
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| Protein Length | 1774 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641278588 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001544222 |
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| Protein GI | 159897975 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAT CAACATGGCC AGCAACATCA GAATTACCTG CTATCCCCAA GGTGCGAATC
TTGGGCGAAA TTGGACGGGG CTTACATAGC ACTGTCTATC GTTGTGTGCG CGATGGGCAA
ACCTATGCCT TGAAAATTCC CCGCCTCAAT GGCAATCAAT CGCCAACTAT GGCAGCGGCA
GCATTTCGGC GCGAAGCCAG TGCCCTCGCC TTGGTACGCC ACCCCAGTTT GCCCGAGGTA
ATCGAGGTCG ATCACTACAA CGAAATGCCC TATATCATTA TGGAGTTGGT TCAAGGCCAA
ACGCTGCTCG ATTTGGTGGC GCTTGGGCCA TTACCTGAAA GTTTAGTCAT TCGGCTGATC
AAAGATTTAG CTAGTGCTTT GGCCGCCGTG CATCGCCAAG GAATTACCCA CCGCGATATT
CAGCCGCGCA ATATGTTGAT GCAGCCCTCA GGCAACATTA AATTAATTGA TTTTGGTTTT
GCCAGCCACA ATAGCCTCGA CCCTGAGCAA ACTCACGTGC TGGGCACGCT GCGCTATAGT
TCGCCCGAAC AAACTGGCTA TCTCAAACGC AATGTCGATG CCCGCTCCGA TCTGTATGCT
TTTGGCGCAG TCTTGTTTGA ATGTTTGGTT GGCGTACCGC CTTTCAATGC CTCAAATATT
ACCGATTTGA TCCGCCAACA TGCCGTTGTG CTCGCCCCCG ATGTACGTTC GATGGCTCCG
CATGTCTCGC CAGCCCTCGC CGAAATCGTC GCTCGCCTGC TGGCCAAAGA TCCTGACGAT
CGTTATCAAA CGGCTGAGGG CTTGCTCTCG GATATTAATC AAATTGATAG CTTAAATCTC
ATGCTCGCCG CTGGTCGCCC AATTCGGCTT GGAGCCGATG ACCTCTGGAC TGGAGCGCTC
TACGATAATG ATTTGATTGG GCGTGATGCC GAGTTGGCAA TCTTACGTCA AGGCTGGAAT
AGCGCTCGCC AAGGCCATGG CAGCGTCATC GCCATCAAAG GCGCGATGGG TTTAGGCAAA
AGCCAATTAG GCCGCGAAAT GCTGCACCGA GCACGGTCGC TTGGTGGTTT GACCTTTGGC
TCAACCTGCG TCAAAGATTC AGCCCTACCC TACAGTGCCT TGCGCAGCCC ATTTGAGCAA
TATGTGCATT ATTTGGAATT GATGCCCGAA AGCCAGCGCC GCCATGCCGA GGAGCAACTA
CGCCAGTTCG TACAAGGCTA CCAAGAGCTG ATGTTGCGTA CATTTCCATG TTTACAGCCA
ATTTTTTCCC ACACCAAACA ACCTGAATTG GTGACCGATT ACGAGCGTTT TAATACGATT
TTGGCTGATC TGCTGCTTTG GATGACCCGC GTGCATCCCG CTGCTGTCTG GTTTATCGAC
GATCTGCAAG CAATCGATGA TGCTAGTTTT AGCGTCATCC GCCGGATTAT CGGGCGCATT
CAGCAAGTTC CGCTATTTTT AATTATTTCT TTAAATGATA GCGTTGATAG CCAGCAAATC
TACGAGCGGC TCACGCTTAA TCAGCCAATT CCTATCCAAG AGATTTTGCT GCATCCCCTG
ACCGATCAGG CTGCCACCCA ATTTATCACC AGCTATTTGG GTGGATACAA CGTCGATCAG
CAAATTATCA ACGAGATTGT CGCTCGCAGT GTTGGCAGTC CCTTTGCCTT GCGCGAATAT
ATCCAAACCT TGTTGGATAC TGGCATGCTG CGTTTGGTCA ACACGTGCTG GATGATCGAC
GACCAAAGTT TGACAAAATT GGCGTTACCT TCGCATGTAG TGCGCTTGGT GCTCAGTCGA
ATCGATGAAC TAAGCCCCAA AGTGCGGGCA ATTCTCGAAT TAGCGGCAGT GCTGGGCTTT
CAATTTCGGC GTAATAGCCT ACTTGCGCTA TGGCAGGGCG AACCAAGCGA AGTCTACGAG
GCCTTAACCA TTGGCGGACG CAGCCATTTA ATCGAGCGCA GCGCTTCGGG CCATTATCAT
TTTGCCCACC AAAATATCTA TCAAGTTTTT CTCGAAGGCA TTACGCCTGA GCAACAGCAA
CAACTCCATG CCCAAATTGC CAAAAATCTT GATCACGAGC AGCTTGAGCC AGAAGCCATG
TATCAATTGG CCTATCACTA TGCCCGCGCT AAAAGCAGCG ACCCAACATT TTTGGCTCGC
GGCTTTACAA TTTTGAGTAA TGCTGGGCAG GTGGCGCTGG AGAATTATGC CTACGATGAG
GCTTATCATT TTTTCGAGCA GGCCTACCAA ATTGCCCAAG GTCAATCATT GCCATTTCAA
GCGCAGCAGC ATGCCCAATT TGCCCAACTC TGTCTACGCT TGGGCCAAAA TCAAACGGCC
TTGGCGCATT TACAAGCAGC ACTCGAACAA ACCAGCGAAC CGGATCATCA GGCGCGGTTG
CTCACGGCGA TTGCCCATAT TCACGCTTGG CAACAACAAC CACGCGACAT TTGGCGCTAC
TTCGACCAAG CATTTGAGGC ATTAAACGAA CCAGCCTTAG ATCGCTCGTT GATTGGATTA
TTGAGTGATA TTGGACGCTC ACTTGGACGC TTGCTCAAAA GTAGTGTGCC ATGGTTGCAA
CCAAGCTCGC CCCAGCAGCA GCAACGGATC ATCATTTTGC TGGAAATTTA TGATACGGTA
GGAATGTATG CCTACCTGAA TAGCCAAATG TTGTTGTTAG TCAGCCTCTT TTTGCGCTCG
TTGGTTTGGG CACGCCGTGG GCGCACTCGT CCGGCCCGTG TGCGAGCATT GAGCAACTAT
GCCAGCATGT GGGCAATGGT TGGTCAGCGC CATTTAGCCA AACGCGCCTT GAATAAAGCC
AAAACTATCG CCACTACCCC GACTGCTGAT CGCATGTTAC AAGCGCGAGT TGCCTTGTAC
GAAGGCTTTA TTAGCCATAT CATTGGCGAT GAAGTGCAGG CTGAACGGCT TTTACGTACA
ACATTACGTC AATATGCAAC GACAATCGAT TCGCTGGCCT ATGGCCATGC CACCGCTGAT
AGTGTGCTCT TGCTCTTTTT ACGAGGCCAT GTGCTGGAAG CATGGCAATT GGTTCAAGAA
ACCTTTGAGC GCTTCGAGCA ACATAATCAT CGCAATGAAC AAACCTGGTT TTTAGAATTA
TGGGCTGCGC CCTTGCTGAT TACGCTTGGT TCGACTGCTG AAGCCCAACG CTACCCGGTG
CCCGACATCA AAGAGCGTCA ACAATGGCTC TTGGCTTGGA AAAATCTAGC CGATGCCTCG
CAGATGATCG TTAACCTTGA GCAGGGCGAT CCAGGCCAGC AAAACGATCA ATTATTGCGC
CATTTTAATC AGCAACATCG CAATAATCCG CGGTTTATGC CGTTTCATTC GCGTTATATG
TACATTTTGC AGGGCTATAT CCGCATCGCT CAGTTTTTAC AACAGCGCAA ACGGGTAACT
GCTCGCCGCT TACGGATTGC CGCACGCCAA GCCTTGTTGG TTGCGACAAC CCCAATTTTG
CGCGGCCATG CTTTAGTTAT TTTTGCGGCA GCGCATGGCT TTGATGGCCG CTTTGCCCAA
GCCCTAGAGT TGCTGGGGCA GGCTGAGCAA TTAGCCCACT TGCACGATGC GCCATGGATT
TTATATGAAG CCCATCGGAT TCGGGCGCAC CTTTTTGGCA TGCAGCAGCA AATGGCCGCT
GCTAAACGCG AAGCCAGTCG CGCTTACACA ATTGCCTTTG ATCATCAATG GGTTTTGCGC
ATGCGCAATA TCGCCGTAGC GTTTCAGCTT GACGACCCAG AACGGCTCAA TTCAACGACC
AGCATTATCA GCGATGATGC GCTACGCCCC GATGATAGCC GCATGCAACG CTTGTTGGAT
GCGCTACTTT CGGTCAGCTT AGCGTGGGCA CAAAGCTACG ATCTCGATGA GCAAGCCCAG
ACTGCGCTCG ATTCGGTAAT TCGGATTTTG GGAGCAGAAC GGGCATTTCT ATTCCTACTC
GAAAACGATG ATTTACAGCT TCGTGCGGCG CGTGATGCCT CAAACAATCC AGTTAGCGAG
ACCTTGCAAG GCTATAGCCG CACGGTGCTA GAGCGAGTAC GCATCACGCA AAAACCAGTG
ATTGTGACTG GAGCCGATGA TGCATTAATT ACCAGCAGCG AAAGTGTCAC TGCTCACAAC
CTACGCAGCG TTTTGGCCGC GCCCTTGATG CTTGATGGGC GATTTTTAGG CGTGGTCTAT
CTCGATAATC GCTTGGCATG GGGCTTTTTC TCCAAGGAAG ATGAAGTTAT TCTGCGAGCG
ATCACCACCC ATATTGCCCT AGGCTTAGAA AAATCGCGCA CTACTCAGCT TGAAATTCAC
ATTAATGCTG AACGTGAGCA ACGCCGTTTG GCCGAACGCC TGCGCGTACT CTCAACCGTG
TTGAATGCGA CGCTTGATTT AGCCGATGTG CTCAGATATG TGCTGATTCA GCTCAACTCG
TTGTTGCCCT ACTATGGAGC CTGCATCGCC CTGCGCGAGG AAAATGAGCT TAAATTTGAG
CAAGTTGAAA GCCCTAGCCC AACCTTATGG GTACGCGGCA CAAAAATCTC AATTAATGAT
GACCCGCTGT TCAAGCAACT AGCGACGCTG CGCCAACCAT TAATTATCAA CGATATCACC
CAAGATCCAC GCTTCAAAGG CTATGGTGAG CATCCAGCCC GTTCATGGCT GGGGCTACCC
TTGCTGGTAC GTGGTGAAAT CGTGGGCTTT TTGGCAATCG ATCGCGATGA ACCCCATGCA
ATTTCGGAGC ATGAGGCCGA ATTGGGCATG GTGTTTGCCT CACAGGCAGC AATCGCAATT
GCCAATGCCC AATTATTTGG TCAAGTGCAA CGCCTGGCAA TCACCGATTC ATTGACCCAA
GTCAGCAATC GTCGTCATTT CTTTGAGTTG GCCGAACGCC AATGGATATT AACATGCAGC
AGCGATCATC CACTTTCAGC GATGATGCTG GATGTTGATC ACTTCAAGCG GGTCAATGAT
AGTTATGGCC ACTCGGTTGG TGATTTAGTG TTGCGCACGG TTGCCGATCT TTGCCGCGCC
AATTTACGGC CTTCGGACTT GCTTGGGCGC TATGGTGGCG AAGAATTTGC GATTTTGCTG
CCTGATACCG ATGTTTCAGC AGCATTGACG ATTGCTGAAC GCTTGCGGGT CGCAATCGCC
AACCATGTGA TTAACCATGA ACAAGCCAGC ATCAACCTAA CGGTGAGCAT TGGAGTGACA
GGTTTGAGCA AAGATGATAA CTCGGTTGCC AGCCTGCTAG ATCGGGCCGA TCGCGGCTTG
TACATTGCCA AAGAAACCGG ACGCGATCGG GTTACGATGG CCTAG
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| Protein sequence | MTQSTWPATS ELPAIPKVRI LGEIGRGLHS TVYRCVRDGQ TYALKIPRLN GNQSPTMAAA
AFRREASALA LVRHPSLPEV IEVDHYNEMP YIIMELVQGQ TLLDLVALGP LPESLVIRLI
KDLASALAAV HRQGITHRDI QPRNMLMQPS GNIKLIDFGF ASHNSLDPEQ THVLGTLRYS
SPEQTGYLKR NVDARSDLYA FGAVLFECLV GVPPFNASNI TDLIRQHAVV LAPDVRSMAP
HVSPALAEIV ARLLAKDPDD RYQTAEGLLS DINQIDSLNL MLAAGRPIRL GADDLWTGAL
YDNDLIGRDA ELAILRQGWN SARQGHGSVI AIKGAMGLGK SQLGREMLHR ARSLGGLTFG
STCVKDSALP YSALRSPFEQ YVHYLELMPE SQRRHAEEQL RQFVQGYQEL MLRTFPCLQP
IFSHTKQPEL VTDYERFNTI LADLLLWMTR VHPAAVWFID DLQAIDDASF SVIRRIIGRI
QQVPLFLIIS LNDSVDSQQI YERLTLNQPI PIQEILLHPL TDQAATQFIT SYLGGYNVDQ
QIINEIVARS VGSPFALREY IQTLLDTGML RLVNTCWMID DQSLTKLALP SHVVRLVLSR
IDELSPKVRA ILELAAVLGF QFRRNSLLAL WQGEPSEVYE ALTIGGRSHL IERSASGHYH
FAHQNIYQVF LEGITPEQQQ QLHAQIAKNL DHEQLEPEAM YQLAYHYARA KSSDPTFLAR
GFTILSNAGQ VALENYAYDE AYHFFEQAYQ IAQGQSLPFQ AQQHAQFAQL CLRLGQNQTA
LAHLQAALEQ TSEPDHQARL LTAIAHIHAW QQQPRDIWRY FDQAFEALNE PALDRSLIGL
LSDIGRSLGR LLKSSVPWLQ PSSPQQQQRI IILLEIYDTV GMYAYLNSQM LLLVSLFLRS
LVWARRGRTR PARVRALSNY ASMWAMVGQR HLAKRALNKA KTIATTPTAD RMLQARVALY
EGFISHIIGD EVQAERLLRT TLRQYATTID SLAYGHATAD SVLLLFLRGH VLEAWQLVQE
TFERFEQHNH RNEQTWFLEL WAAPLLITLG STAEAQRYPV PDIKERQQWL LAWKNLADAS
QMIVNLEQGD PGQQNDQLLR HFNQQHRNNP RFMPFHSRYM YILQGYIRIA QFLQQRKRVT
ARRLRIAARQ ALLVATTPIL RGHALVIFAA AHGFDGRFAQ ALELLGQAEQ LAHLHDAPWI
LYEAHRIRAH LFGMQQQMAA AKREASRAYT IAFDHQWVLR MRNIAVAFQL DDPERLNSTT
SIISDDALRP DDSRMQRLLD ALLSVSLAWA QSYDLDEQAQ TALDSVIRIL GAERAFLFLL
ENDDLQLRAA RDASNNPVSE TLQGYSRTVL ERVRITQKPV IVTGADDALI TSSESVTAHN
LRSVLAAPLM LDGRFLGVVY LDNRLAWGFF SKEDEVILRA ITTHIALGLE KSRTTQLEIH
INAEREQRRL AERLRVLSTV LNATLDLADV LRYVLIQLNS LLPYYGACIA LREENELKFE
QVESPSPTLW VRGTKISIND DPLFKQLATL RQPLIINDIT QDPRFKGYGE HPARSWLGLP
LLVRGEIVGF LAIDRDEPHA ISEHEAELGM VFASQAAIAI ANAQLFGQVQ RLAITDSLTQ
VSNRRHFFEL AERQWILTCS SDHPLSAMML DVDHFKRVND SYGHSVGDLV LRTVADLCRA
NLRPSDLLGR YGGEEFAILL PDTDVSAALT IAERLRVAIA NHVINHEQAS INLTVSIGVT
GLSKDDNSVA SLLDRADRGL YIAKETGRDR VTMA
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