| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1415 |
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| Symbol | |
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| ID | 5733323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1631536 |
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| End bp | 1632963 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641278553 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001544187 |
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| Protein GI | 159897940 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00176967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGGA TCGTGATCGA TCAAAAAATT GCAGTTTGCG TCGTCTTTGT AGCGGCGTTG
TTTATGAGCA TTATGGATGG CACAATTATC AACGTGGCAC TAGCAACCAT CCAACAAGAT
TTTGGCGCGA GTAGCAGCGC GATCAACGCA ATCGTGGTGA TCTATTTAAT TTGTATTGCG
GTGGTGATTC CGGCTTCGGG TTGGTTGGGC GACCGTTGGA ACACCAAATG GGTCTTTTTA
ACCTCACTTG GTTTGTTTAC GTTGGCCTCG CTGGCCTGTG GCTTAGCTCA AAATATTGAG
CAATTGATGC TAACTCGGGC GGCTCAAGGC ATCGCAGCAG GCGCACTAAT GCCAGTCGGC
ACAACCATGC TCTTTCGGAC TTTCCCGCCG CACCAGCGCA TCCAAGTTTC GCGGGTGCTG
ATTATTCCAA CGGTGATAGC ACCCGCAGTT GGGCCGGTGC TCGGCGGATT TTTAGTCGAT
CATCTGTCGT GGCACTGGGT CTTTTTCGTC AATGGCCCAA TTGGCTTAGC CGCGCTGATC
TTCGGGGTCA TTTGGTTGCA AGCGCCTGCC CAAGAAGAAG TTGGCGCATT CGATTGGCTG
GGTTTTATTT TAGCGGGCGC TGGCTTTGCC GCCTTGCTCT ACACCTTGAC CGAAGGCGCG
AGCAAAGGCT GGGGTTCGCC AATCATTTTG GTTAGTGCCG CGATTGGGGT TGGCGCACTT
GCCGCGCTGG TGGTCGTTGA ATTAGCCAAA GCCAAGCCAA TGCTTGATCT GCGGCTCTTC
TCCATTCGCT TGTTTCGCGT CAGCAATTTA GTAGCGATTT TTGGCTCAGC CGCCTTTACG
GGCATTCTGT TTCTGATGCC CCAATTTTTG CAAAATGTCG TTGGAGCCAG TGCGCTCGAA
TCGGGCTTGA CCACCTCGCC CGAAGCGATT GGCGTGGTAC TATCGAGCCA AATCGTAGCG
CGACTTTACC CCAAAGTTGG CCCACGCCGC TTGACTTTTG GCGGGGTTTT AGGGGTTGCC
GTGATGATGG GCTTGATGAG CACAATCGAT GCTGAAACCA ATTTGTGGTT GGTACGTGCC
TTGATGTTTG GCACAGGCGT GGGGATGGCC TACCTCTTTT TGCCAATTGA GGCCGCCGTT
TTTGCCCAAA TTCCGCATGC CTCAACTGGC CAAGCTTCAG CAATTTTCAG CATGCAACAA
CAACTTGGTT CGGCCTTGGG CGTAGCCATT TTGGGCAGCG TGTTGGCGCT CAATCATAGC
GGCACAACAG TTAATCAAAA TGCCCAAAGC TATCAGTATG CCTTCTTGGC AGCAGCAATT
TTGGCATTTG TTTCAGCCTG TGTAGCGTTG TTTATTCGCG ATCGCGATGC AGCGGCGACC
ATGGCCCAAC ATGGCGAGCA CAGTGAATTG AGTCATTCAA TCGCCTAA
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| Protein sequence | MKRIVIDQKI AVCVVFVAAL FMSIMDGTII NVALATIQQD FGASSSAINA IVVIYLICIA
VVIPASGWLG DRWNTKWVFL TSLGLFTLAS LACGLAQNIE QLMLTRAAQG IAAGALMPVG
TTMLFRTFPP HQRIQVSRVL IIPTVIAPAV GPVLGGFLVD HLSWHWVFFV NGPIGLAALI
FGVIWLQAPA QEEVGAFDWL GFILAGAGFA ALLYTLTEGA SKGWGSPIIL VSAAIGVGAL
AALVVVELAK AKPMLDLRLF SIRLFRVSNL VAIFGSAAFT GILFLMPQFL QNVVGASALE
SGLTTSPEAI GVVLSSQIVA RLYPKVGPRR LTFGGVLGVA VMMGLMSTID AETNLWLVRA
LMFGTGVGMA YLFLPIEAAV FAQIPHASTG QASAIFSMQQ QLGSALGVAI LGSVLALNHS
GTTVNQNAQS YQYAFLAAAI LAFVSACVAL FIRDRDAAAT MAQHGEHSEL SHSIA
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