Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1411 |
Symbol | |
ID | 5733319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 1625411 |
End bp | 1627195 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641278549 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_001544183 |
Protein GI | 159897936 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00209555 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCCGAA CTCACACCTG CGGCGAGTTG CGCCGCGACC ACATCGACCA AACCGTGACG TTAGCTGGTT GGGTTCATCG CCGCCGTGAT CACGGCACGG TGCTCTTTTT AGATTTGCGT GATCGCTATG GCTTGACCCA AGTGATTGTT GATCCTTCGT CGAATCCCGA AGCTCGCGCT ATGCTCGATA GCATCAAAAA TGAGTATGTG ATTCAGGTAA CTGGGCGGGT GCGCTCACGG CTTGAGGGCG CAGAAAATGC CAATTTGGCA ACTGGCGCGA TCGAACTCGA AGTGCAAAGT GCCAAGATTC TCAACACTGC CAAAACTCCG CCAATCTTGG TGAATCGTGA TGGTGGCGAG GATGAAGCGC TGCGCTTGAA ATATCGCTAT ATTGAATTGC GCCGCGAACG CCAACAGCAT ATCTTGGGGT TACGCCATCG CACGATCAAA TTTATGCGCG ATTGGATGGA TCGCGAGGGC TTTTGGGAAA TTGAAACCCC GATTTTGATG AAAAGCACGC CCGAAGGCGC ACGCGACTAT CTTGTGCCAA GTCGCTTACA TCCAGGCGAA TTTTATGCAT TGCCCCAATC GCCACAACAA CTTAAGCAAT TGTTGATGGT TTCGGGGATC GACAAGTATT TCCAAATTGC GCGTTGTATG CGTGATGAAG ATTTACGCGC CGACCGCCAG CCTGAATTCA CTCAACTCGA CATTGAGATG AGCTTTGTTG AGCAAGATGA TGTACTTGAT GTTGTCGAAC GCTTGATGAC TGAACTGGTG GCCAATGTCA CGCCGCACAA ACGCTTGGTT TCGCCCTTCC CACGGCTCAC CTACGCCGAC GCGATTGAAT ATTACGGCTC CGATAAGCCC GATTTGCGCT ACGACTTGAA ATTTGTCAAC GTAGGCGAAA TCGTCAAAGA TAGCCAATTT GGCGTGTTTA CTGGTGCACT CAGCAGCGGC GGCAAAGTTC AAGCCATTCG CTTGCCTGGC TGTGGCAGCT ATTCACGTAA GCAAATCGAC GATCTGCAAG AAGTTGCCAA AATTGGTGGA GCCAAAGGCA TGGCTTGGAT GGCGATCGAA GCTGATGGCA GCGTGCGCTC GCCAATCGCA AAATTCTTCG AGCAAGCCCA ACTTGATCAA TTAAAGAGTG CAACGGCGGC TGAAGCTGGC GACTTAATTG TCTATGTTGC CGACAAACCA GCAGTGGTAG CGGCCTCGTT AGATAAAGTA CGGCGCGAAA TGGCCAAGCG GCTCGATCTT GCCGACAAAG ATCTGATGCA TTTTGCCTGG GTAATCGACT TCCCAATGTT TGAATACAAT GCCGAAAGTG GCGAATGGGA TGCCGCTCAC CATCCATTCT GTATGGTCAA CCCTGCCGAT GTTGAAAAAA TGCAGCGCGG CGAGTTTGAA GGCGTGCGGG CCGCCTCATA CGACTTGGTA TGTAACGGCT ACGAGTTGGC TTCTGGCTCA ATTCGGATTC ACGATCGCAG CATTCAGCAA TACATTTTTG ATCGCTTGCC CTACAGCCCT GAAGAAATTC AAAAGCGCTT TGGGCATATG TTGGAAGCCT TCGAATATGG CGCACCACCT CATGGCGGTA TGGCCCCAGG CATCGATCGC TTGGTGATGT TGTTGGCTGA TACCGACAAC ATTCGCGATG TGATTGCCTT CCCCAAAACT CAACGCGCCG AAGATCTGAT GATGAATGCG CCATCATCGG TTGATGCCAA GCAATTACGC GAGCTTGGCT TGCGCTTGGC CGATGGAGTT GAACCACGCG GTTAA
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Protein sequence | MLRTHTCGEL RRDHIDQTVT LAGWVHRRRD HGTVLFLDLR DRYGLTQVIV DPSSNPEARA MLDSIKNEYV IQVTGRVRSR LEGAENANLA TGAIELEVQS AKILNTAKTP PILVNRDGGE DEALRLKYRY IELRRERQQH ILGLRHRTIK FMRDWMDREG FWEIETPILM KSTPEGARDY LVPSRLHPGE FYALPQSPQQ LKQLLMVSGI DKYFQIARCM RDEDLRADRQ PEFTQLDIEM SFVEQDDVLD VVERLMTELV ANVTPHKRLV SPFPRLTYAD AIEYYGSDKP DLRYDLKFVN VGEIVKDSQF GVFTGALSSG GKVQAIRLPG CGSYSRKQID DLQEVAKIGG AKGMAWMAIE ADGSVRSPIA KFFEQAQLDQ LKSATAAEAG DLIVYVADKP AVVAASLDKV RREMAKRLDL ADKDLMHFAW VIDFPMFEYN AESGEWDAAH HPFCMVNPAD VEKMQRGEFE GVRAASYDLV CNGYELASGS IRIHDRSIQQ YIFDRLPYSP EEIQKRFGHM LEAFEYGAPP HGGMAPGIDR LVMLLADTDN IRDVIAFPKT QRAEDLMMNA PSSVDAKQLR ELGLRLADGV EPRG
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