Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1384 |
Symbol | |
ID | 5733276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 1598769 |
End bp | 1600202 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641278522 |
Product | hypothetical protein |
Protein accession | YP_001544157 |
Protein GI | 159897910 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGAATG CTGTCGAACT GGCAAAGTGC CATGCCGACC CTGCCTACTT CACCCACCAC TTCGGATTAA TCGACGATGC CCAAGGGTTG GGGGATGGCA GCGGCGCGAT GCCCTTTACG CTCTGGCCTG CCCAAGTACA GGTGCTCTGG ACACTCTTAA TCCAGCGTTT GGTCTTGATT CTCAAGGCAC GGCAATTAGG CATTAGTTGG TTGTGTTGCG CCTATGCGTT GTGGCTCTGC CTCTTCCAAC CGGGCAAAGT GGTGCTGATC TTCAGCAAAG GCCAAGGCGA AGCCGATGAG ATGCTGCAAC GGGTCAAGCG CTTGTATGAA CGCTTACCCG AGTGGATGCG TGAGGCCTCG CCAGCGCTAG TCACGGACAA CACGACCGAA CTGGAATGGG CCAATGGCAG TCGGGTCAAG TCACTCCCCG CGACCAAAGG GGCAGGTCGC AGCTTTACGG CATCACTGGT GATTTTGGAC GAAGCCGCGT TCCTGCTCTG GGCAACCCAG TTGTATACCG CGCTCAAGCC CACGATCGAC GGCGGCGGCC AACTGATTGT CTTATCGACG GCCAATGGGA TTGGCAATCT GTTTCATCAA CTGTGGCTCA AGGCCATCAG TGCCAAAAAT CGCTTTACCA CGATCTTTTT ACCGTGGTGG GCACGACCAA CGCGGGATGC GGCGTGGTAT CACAACCAGC TTGAGGAATA TACCGACCCG GACATGGTGC GGCAAGAATA TCCCTCAACC GCGCAAGAAG CCTTTTTGGT GTCAGGGCGC ACGCGATTCA AAATGCCATG GCTGCTGAAG CAAAATCCCA GCGATGGCCT TGCGCTCGAT GAGCTTCCAG CATCGCTCTC GCTCCTGGAC GGCGTGACCG TTTACCACCT GCCGCAGCAA GGACGACGCT ACATTCTGGC AGCGGACGTG GCCGAAGGGC TGGAGCACGG CGACTTCTGC GCTGCCACCT TGATCGATGC GGTGTCGTGG GAAGAAATGG CCAGCGTCCA CGGCAAATGG GAACCGGACG AATACGCTCG CATTCTCATG AATTTGTCAG ACGTGTACGG GGCCACGGTT GCGGTTGAGC GGAACAATCA CGGTCACGCG GTATTGACCA CGATGAAACT GGCCGGATTC ACCCGCATCG TGTATGGCCT TGATGGGCGA GCAGGGTGGC TCACCAATGC GCAGACCAAG CCGCAAATGA TTGACTTGTT CGCCACGGCA CTGCGCGATG TGTTGGTCAC AATTCGCAAT CAAACGGCGC TGAATGAACT GGCGATTTAT CGGATTTTGA AGAACGGCGG GACGGGCGCA CCCGCAGGCT ATCACGATGA TTTCGTGATG GCATGGGCCA TTGCCCTGAT GGTTGCCAGT CAACCAATGG AAGTCGAAGA CGAAGCCATG GCTGGCTCGT GGAATAGCTA CTAG
|
Protein sequence | MSNAVELAKC HADPAYFTHH FGLIDDAQGL GDGSGAMPFT LWPAQVQVLW TLLIQRLVLI LKARQLGISW LCCAYALWLC LFQPGKVVLI FSKGQGEADE MLQRVKRLYE RLPEWMREAS PALVTDNTTE LEWANGSRVK SLPATKGAGR SFTASLVILD EAAFLLWATQ LYTALKPTID GGGQLIVLST ANGIGNLFHQ LWLKAISAKN RFTTIFLPWW ARPTRDAAWY HNQLEEYTDP DMVRQEYPST AQEAFLVSGR TRFKMPWLLK QNPSDGLALD ELPASLSLLD GVTVYHLPQQ GRRYILAADV AEGLEHGDFC AATLIDAVSW EEMASVHGKW EPDEYARILM NLSDVYGATV AVERNNHGHA VLTTMKLAGF TRIVYGLDGR AGWLTNAQTK PQMIDLFATA LRDVLVTIRN QTALNELAIY RILKNGGTGA PAGYHDDFVM AWAIALMVAS QPMEVEDEAM AGSWNSY
|
| |