Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1317 |
Symbol | |
ID | 5733211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 1526034 |
End bp | 1526894 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641278458 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001544093 |
Protein GI | 159897846 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCCAG AAACACTTAT CCAACAGATG AGCCATGGCT GGGTTCACGC CCCGATTGCC TCGCTGATTT ATCATCGCAA TGGCCGCGCC GAATTGCTCA ACCGCGCCGG AATGGAGTTA TTGCAATATC AGCCGGAAGA GGCTGCCCTA GCTCAACAAC ATTATAATCT GCATCGAGAC CCTTCACTCC AAGCGCCGCT AACCAAAAGT GCCATTGCCT CAGCTTTTGA GGGCAAAAAA ACCCGCATCG GCGAGTTGGA TTATGAGTTG CTAAATGTGC AGGCGCGGCC TTCTGGCAAA CATATTGTGG CGCGACTCAA TCTGGCTCCG CTACGGGTCG AAGCCAAAAC TGGCGAGTAT ATTGTGGCAT TTTTTACCGA TATCACGCCC CAAGTAACCC TGCGCCGCGA ACTCGATAGC CGCAAGCACG AAATTCAACA GGCCGAACAA CAACAAGAAG CGCTACGAGC CGAAATCGAA GCTCGTTCAG CTCCGGTTGT GCCAGTGTTG CCCGGCATTT TGGTGTTGCC CTTGGTTGGC GCGATCGATT CACGCCGCGC CGAATATGTC TTGAATTGTT TGCTCGAAGC CGCCTCAGAG CATAGCGCCG ATACGCTGTT GCTCGATGTT ACGGGCATTC CGGTGGTCGA TACGGCTGTA GCCAATTATC TGCTGCAAGC CATCAAAGCG CTCAAATTGC TTGGCACCGA CACCATTGTG GTTGGCATCA GCCCCGAAAT TGCCCAAACC TTGGTGCAAT TGGGCCTGCG GCTGGAAGAT ATTACCACTC GCGCCGATTT ACAAAGTGGC TTGCAGACCG CCCTTCGTCG CCAAGGCCAA ATTATTCGTG CTCGTTCGTG A
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Protein sequence | MLPETLIQQM SHGWVHAPIA SLIYHRNGRA ELLNRAGMEL LQYQPEEAAL AQQHYNLHRD PSLQAPLTKS AIASAFEGKK TRIGELDYEL LNVQARPSGK HIVARLNLAP LRVEAKTGEY IVAFFTDITP QVTLRRELDS RKHEIQQAEQ QQEALRAEIE ARSAPVVPVL PGILVLPLVG AIDSRRAEYV LNCLLEAASE HSADTLLLDV TGIPVVDTAV ANYLLQAIKA LKLLGTDTIV VGISPEIAQT LVQLGLRLED ITTRADLQSG LQTALRRQGQ IIRARS
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