Gene Haur_1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1310 
Symbol 
ID5733203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp1520472 
End bp1521089 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content47% 
IMG OID641278450 
Producthypothetical protein 
Protein accessionYP_001544086 
Protein GI159897839 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00619746 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCAA CTCGTTATCA AATTCCGGCA GCTGAGCATG AATTTGAACA AGATATCAAA 
CATTCACGCT TTATTGCGAC GGTTGTGCAT GCGCCAAGCT TAGTTGAAGC CAAACAAGCG 
ATTGCCACGA TTGCCGCGCG TTATCCTGAC GCAACCCATA ATTGTTGGGC GTTTCAAATT 
GGGCTTGGCC CCCAAGCCGA AATTGGCTCA TCCGATGATG GCGAGCCTGC TGGTACGGCT 
GGTCGCCCGA TGTTGCAAGT GTTGCAAGGC AGTGGTATTG GCGATATCGC AGCAGTCGTG 
ACCCGCTATT TTGGCGGAAT CAAATTAGGC AGTGGCGGCT TGGTTCGGGC ATATAGTGGA 
ACCTTACAAA AAGCCCTGAA TGATTTACCA ACCAAAGAGC AAGTCATTCG TCGCACTGGT 
ATGGTGACGA TTAATTACAA TCAATACGAA TTATTGCGGC GTTTGCTGAA TACATTTGAT 
CCAGTGATTG AAAGTGAAGA TTTTGCCAGC GATATTACCT TGATGCTGGC ATTGCCTCAA 
GATCGCTGGC AAGAATGTGC GGCGGCTATT CGTGAATTAA CCTATGCTGA AAGCGAATTA 
ATCGCGCTTG ATGATTAA
 
Protein sequence
MTPTRYQIPA AEHEFEQDIK HSRFIATVVH APSLVEAKQA IATIAARYPD ATHNCWAFQI 
GLGPQAEIGS SDDGEPAGTA GRPMLQVLQG SGIGDIAAVV TRYFGGIKLG SGGLVRAYSG 
TLQKALNDLP TKEQVIRRTG MVTINYNQYE LLRRLLNTFD PVIESEDFAS DITLMLALPQ 
DRWQECAAAI RELTYAESEL IALDD