Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1305 |
Symbol | |
ID | 5733198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1515886 |
End bp | 1516632 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641278445 |
Product | methyltransferase type 12 |
Protein accession | YP_001544081 |
Protein GI | 159897834 |
COG category | [R] General function prediction only |
COG ID | [COG4976] Predicted methyltransferase (contains TPR repeat) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.342491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTATA ACGATTATGC CCGTTACTAT GATGACGGGC AACTCCATTT TAGCGTCTTG ATGTTTGATT ATTTGCAGCG AGTGCTGGAG CGTCATCCCG TTCCTGGCCG TTCGATGATC GATTTAGCCT GCGGTACAGG AACGCTGGCA TTATTACACG CCGATTTGGG CTGGGATGTG TTGGGAATCG ATGCCTCGCG TGAGATGCTG AAGGTAGCTC AACGCAAAGC CCGTGGTGAT CTGACCCAAC AACGCTCAAT TCGTTTTCGG CGTGCTGATA TGCGCGATTG GCAGGTGAGC CAGCCAGTCC AACTGGTCAC TTGTTTTTAC GATAGCCTCA ATTATTTGCT CGAAGAAGCT GATCTGGATG CGACATTTGG CTGCGTTGCG GCAGCGCTTG AAGCTGGCGG ACGCTGGATT TTCGATATTA ACACGCCCTA TTTTCTAGAG CATGTTTGGC AGCCAGTCGA AGTTGATGAG CGTGATGGCT ATGTCCACAT TATGCATTCA GAATTTGAGC CAGAACGTTG TATTTCGTGG TTGCAATTAA CTGGTTTTGC CCAACGCAGT GATGGTCTGT TTGAACGATT TAGTGAGCAA CATGCCGAAC GCGGTTATAG CCAAGCCATA TTAGAGCAAC TTTTACAGGC AAACGGGTTT ACAATAGAGG CCGTGTACGA TTGTTTCGTG CTGACTGAAC CAACCCCGAT TAGTCATCGG TGGTTGTGGG TATGTACCAA ACAATGA
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Protein sequence | MMYNDYARYY DDGQLHFSVL MFDYLQRVLE RHPVPGRSMI DLACGTGTLA LLHADLGWDV LGIDASREML KVAQRKARGD LTQQRSIRFR RADMRDWQVS QPVQLVTCFY DSLNYLLEEA DLDATFGCVA AALEAGGRWI FDINTPYFLE HVWQPVEVDE RDGYVHIMHS EFEPERCISW LQLTGFAQRS DGLFERFSEQ HAERGYSQAI LEQLLQANGF TIEAVYDCFV LTEPTPISHR WLWVCTKQ
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