| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1278 |
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| Symbol | |
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| ID | 5733171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1487276 |
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| End bp | 1488187 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641278418 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_001544054 |
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| Protein GI | 159897807 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.124871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGTTGC ACGCCAGCAA CGAACCAGCC CTTGATGATG GGCTGCAACG TTATCTTAAT
GAAATTGCTG AAACTCCACT CCTGGCAGCA GAAGAGGAGC AAAAGCTAAC CCAAATTGTC
CATGTAGCGC GTCAAGCTCA GCCAACCCCA GCCTGTCGAA TTGAACGTTG CCCAAGTTGT
GCCCTATTTG AGCAATGTGT AACCAAACTC AAAGAGCCAG CCCACGAGCA ACTGGTGCGG
GCTAATTTAC GCTTGGTCGT CAGCATCGCC AAGCGCTATC GTGGCTTTGG CCTGCCCTTC
CAAGATTTAA TTCAAGAGGG CAACATTGGC CTGATGAATG CGATCGAGCG CTTTGATGCC
ACCAAAGGCG TGCGCTTCTC AACCTATGCT ACCTGGTGGA TTCGCCAAGC GATCACACGT
TCGCTGGCCA ATCAAGGTCG CTTAATTCGC TTGCCAGTCC ATCGCTGGGA GCTGTTGATT
AAAGTGCGGC GGATCGAAAC CAAATTACTG CAAGCGCTAG GCCGTGAACC AAGCGCCAAC
GAAATTAGCA CTGCCTTGGG TGTCCCTGAA GAAAAAATTT GCGATTTACT GAGCATCGCC
CAAGTGCCAA TCTCGCTGGC AACCCCTAAA AATGAAGAAA CTGATATGTT GCTCGGCGAT
AGCTTGCCCG ACGAAGATTG GGAAGACGAA CTCGAATGTC TGCTGACCAG CATTGATGCT
CAATATACCC GTGCCATGCT CAACCAACTT TCTGAGCAAG AGCAAGAAGT GTTGACGCTG
CGCTATGGCT TAAAAGATGG TAAAAGCCGT TCACTCTCGG AAGTTGGCGC AGTGGTGGGC
CGCACGCGCC AGCGGATTCA ACAAATCGAA GCGGGTGCAT TGCAAGTCTT GCGCACGCAG
TTATCGCAAT AG
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| Protein sequence | MMLHASNEPA LDDGLQRYLN EIAETPLLAA EEEQKLTQIV HVARQAQPTP ACRIERCPSC
ALFEQCVTKL KEPAHEQLVR ANLRLVVSIA KRYRGFGLPF QDLIQEGNIG LMNAIERFDA
TKGVRFSTYA TWWIRQAITR SLANQGRLIR LPVHRWELLI KVRRIETKLL QALGREPSAN
EISTALGVPE EKICDLLSIA QVPISLATPK NEETDMLLGD SLPDEDWEDE LECLLTSIDA
QYTRAMLNQL SEQEQEVLTL RYGLKDGKSR SLSEVGAVVG RTRQRIQQIE AGALQVLRTQ
LSQ
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