Gene Haur_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1253 
Symbol 
ID5733131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1463338 
End bp1464348 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content47% 
IMG OID641278393 
Producthypothetical protein 
Protein accessionYP_001544029 
Protein GI159897782 
COG category[S] Function unknown 
COG ID[COG4984] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAGC TTCCTGATCC ACTTGATCAA GCCCCAACCC GCGACATACT CCATCATTAT 
GTTGATGAAG GAATTTTTAA TCGGCCAACG ATGAAACGCG CCTTACAACT AAGCGGGTTT
ACGCCAACGG CCCAAGCTTG GGTGCGCTTT TTCAACCTTA TCTTGCTGGT GCTGGGCGCT
GGCTTGGCGG TTTGTGGGGT CTATTTCTTC TTTGCATTCA ATTGGGCCAG CATGCATCGC
TTCGCCAAAT TGGGCCTAGT TGAAGGCGCA TTGCTTATTT CGATCGTGGC AGCCTTGTGG
TATGGCTTGG AACGAATTCA AGGCAAGATT TTATTAATGG TCAGTGCATG TTTGGTTGGG
GCACTCATGG CCCTGTTTGG CCAAATTTAT CAAACTGGCG CTGATGCCTA CACCCTGTTC
TTGAATTGGG CTTTAGTGAT CACCGGCTTG GCAATTGCTG GCAATTTTGC GCCGTTATGG
CTGCTGTGGT GGGGGCTTTG GAACCTTACG ATTGTGCTTT ACTACGATCA AACGAGTGAT
TTTCGCAACA CCAACGATTT ATTCGTCTTA TTGCTCTTCA ATGCCCTGAT TTTTGCGCTT
GCTGAAGGCC TACGCCAACG CAAATTAGCT TGGCTCCAAA CCAATTGGCT CCATCGGGTA
CTTGGTTTAG GCCTCCTTTG GGTGCTCAGC TTAATCAGCA ATAACTTCGT CGATACGGTA
TTCAGCTATG GATCGGACAA ACCGAGTATC GCATTATTCT TGCTGTATAG CTTAGCGCTT
GTGATGCTAG GATTAATGGG TGCTTACCAT TATTTTGTAA CGTTTGATGG GCTATTAGCC
TTAGCAAGCC TTGGTACAAT TTGTTTTTTT GTCGATTGTT GGCTCTTCGA ATGGCTTTCA
TATGATTCTG GAGCGACATT CCTATTTGGT GGCATGATCA TTTTGGGTCA AACAGTGGTC
TCAATTCTCT GGGTTCGCCA ACGCCAACAA CTGCTAGGAG GCCATGCATG A
 
Protein sequence
MIELPDPLDQ APTRDILHHY VDEGIFNRPT MKRALQLSGF TPTAQAWVRF FNLILLVLGA 
GLAVCGVYFF FAFNWASMHR FAKLGLVEGA LLISIVAALW YGLERIQGKI LLMVSACLVG
ALMALFGQIY QTGADAYTLF LNWALVITGL AIAGNFAPLW LLWWGLWNLT IVLYYDQTSD
FRNTNDLFVL LLFNALIFAL AEGLRQRKLA WLQTNWLHRV LGLGLLWVLS LISNNFVDTV
FSYGSDKPSI ALFLLYSLAL VMLGLMGAYH YFVTFDGLLA LASLGTICFF VDCWLFEWLS
YDSGATFLFG GMIILGQTVV SILWVRQRQQ LLGGHA