Gene Haur_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1242 
Symbol 
ID5733150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1447833 
End bp1448855 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content54% 
IMG OID641278382 
ProductLacI family transcription regulator 
Protein accessionYP_001544018 
Protein GI159897771 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAACGA TGGTCGATGT CGCGAAACGA GCCGGAGTTG CGCTCAGCAC CGTCTCATAT 
GCACTCAATG GAACGAGGCC GATCTCTGAA GAAACCCGCC AGCGGATTTA TGCCGCGATG
GAGGAGCTGG GTTACAAACC GCATGCCTTA GCTCGCGGTT TGGCCAGTAA GCGCAGCAAA
ATTATTGCCC TGCTTTTCCC CACGCCTGAA CGTGGCTTAG GCTTAACTGA GCTTGAGTTT
GTCACCAGTG CGGCGGAAGC GGCCCGCAAT AAAGGCTACC ACCTGGTTTT ATGGTCGTTG
CCCACCGATT CCAGCGAGCT ACGCCAACTC TTGCAACAAG GCCTTGTCGA TGGCGTGTTG
GTGATGGAAG TCCACCTCAA TGATCCACGG ATTGAATTAC TGCGCGAGCT TGAATTTCCC
TTCAGCATGA TTGGGCGTTG TGCCGAAAGC ACTGGCATGA GCTATGTTGA TATCGATTTT
GATCGCACGA CCCAACTCGC AGTCAATTGC CTCGCTGAGC TTGGCCACCG CCAAATTGGC
TTTATCAATC ATTCACACGA AGCGTTTGAG GCTGGCTACG GACCGACCGT GCGGGTGGCG
CAACGCTTCA ATGAGGCGAT TGCTGCCGCT CAATTACACG GTGTGAGCAG CTTTTGCCAC
GATTCAGTTG CCGCAGGCTA CGAAACCTTT AACCAACTTT TAACCGATCA TCCAGCTTTA
AGTGGCTTGA TTGTGATGAA TGAACGGGCA ATTCCAGGCA TTATTCAAGC TGTCAGCGAA
CGTGGCTGGT CAATTCCCGA CGATATTTCG CTGATTTCGC TGGTTTCTTC GGCGCGGGTT
GCCGAAATGA CCTTGCCAAC CCTGACGACT CTAGAACCAC CAATCGCCGA GCTTGGGGCG
TTGGGGGTCG ATTTACTCAT CCAACAACTC GAAGCCCAAG ATCGCGAGTT GCCCCAAGCA
CTCTTGCCAT GTCAACTAGT TGTGCGCGGC AGTACCGGTC AAGCACGGCG CACAGAACGA
TAG
 
Protein sequence
MPTMVDVAKR AGVALSTVSY ALNGTRPISE ETRQRIYAAM EELGYKPHAL ARGLASKRSK 
IIALLFPTPE RGLGLTELEF VTSAAEAARN KGYHLVLWSL PTDSSELRQL LQQGLVDGVL
VMEVHLNDPR IELLRELEFP FSMIGRCAES TGMSYVDIDF DRTTQLAVNC LAELGHRQIG
FINHSHEAFE AGYGPTVRVA QRFNEAIAAA QLHGVSSFCH DSVAAGYETF NQLLTDHPAL
SGLIVMNERA IPGIIQAVSE RGWSIPDDIS LISLVSSARV AEMTLPTLTT LEPPIAELGA
LGVDLLIQQL EAQDRELPQA LLPCQLVVRG STGQARRTER