Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1242 |
Symbol | |
ID | 5733150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1447833 |
End bp | 1448855 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641278382 |
Product | LacI family transcription regulator |
Protein accession | YP_001544018 |
Protein GI | 159897771 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCAACGA TGGTCGATGT CGCGAAACGA GCCGGAGTTG CGCTCAGCAC CGTCTCATAT GCACTCAATG GAACGAGGCC GATCTCTGAA GAAACCCGCC AGCGGATTTA TGCCGCGATG GAGGAGCTGG GTTACAAACC GCATGCCTTA GCTCGCGGTT TGGCCAGTAA GCGCAGCAAA ATTATTGCCC TGCTTTTCCC CACGCCTGAA CGTGGCTTAG GCTTAACTGA GCTTGAGTTT GTCACCAGTG CGGCGGAAGC GGCCCGCAAT AAAGGCTACC ACCTGGTTTT ATGGTCGTTG CCCACCGATT CCAGCGAGCT ACGCCAACTC TTGCAACAAG GCCTTGTCGA TGGCGTGTTG GTGATGGAAG TCCACCTCAA TGATCCACGG ATTGAATTAC TGCGCGAGCT TGAATTTCCC TTCAGCATGA TTGGGCGTTG TGCCGAAAGC ACTGGCATGA GCTATGTTGA TATCGATTTT GATCGCACGA CCCAACTCGC AGTCAATTGC CTCGCTGAGC TTGGCCACCG CCAAATTGGC TTTATCAATC ATTCACACGA AGCGTTTGAG GCTGGCTACG GACCGACCGT GCGGGTGGCG CAACGCTTCA ATGAGGCGAT TGCTGCCGCT CAATTACACG GTGTGAGCAG CTTTTGCCAC GATTCAGTTG CCGCAGGCTA CGAAACCTTT AACCAACTTT TAACCGATCA TCCAGCTTTA AGTGGCTTGA TTGTGATGAA TGAACGGGCA ATTCCAGGCA TTATTCAAGC TGTCAGCGAA CGTGGCTGGT CAATTCCCGA CGATATTTCG CTGATTTCGC TGGTTTCTTC GGCGCGGGTT GCCGAAATGA CCTTGCCAAC CCTGACGACT CTAGAACCAC CAATCGCCGA GCTTGGGGCG TTGGGGGTCG ATTTACTCAT CCAACAACTC GAAGCCCAAG ATCGCGAGTT GCCCCAAGCA CTCTTGCCAT GTCAACTAGT TGTGCGCGGC AGTACCGGTC AAGCACGGCG CACAGAACGA TAG
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Protein sequence | MPTMVDVAKR AGVALSTVSY ALNGTRPISE ETRQRIYAAM EELGYKPHAL ARGLASKRSK IIALLFPTPE RGLGLTELEF VTSAAEAARN KGYHLVLWSL PTDSSELRQL LQQGLVDGVL VMEVHLNDPR IELLRELEFP FSMIGRCAES TGMSYVDIDF DRTTQLAVNC LAELGHRQIG FINHSHEAFE AGYGPTVRVA QRFNEAIAAA QLHGVSSFCH DSVAAGYETF NQLLTDHPAL SGLIVMNERA IPGIIQAVSE RGWSIPDDIS LISLVSSARV AEMTLPTLTT LEPPIAELGA LGVDLLIQQL EAQDRELPQA LLPCQLVVRG STGQARRTER
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