Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1241 |
Symbol | |
ID | 5733149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 1446021 |
End bp | 1447421 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641278381 |
Product | pyridoxal-dependent decarboxylase |
Protein accession | YP_001544017 |
Protein GI | 159897770 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCCAG TTTTAGCCCA CGATGCCGCT CAAATCGACC ACATTTTAGC GCAGACCCTT GCCACAGCCA AACAATTTCT CCACGATTTG CCACAGCGTC CGGTTGGAGT TGCGCCGCAA AGCCACCAAC CAAGCCAATT ACCAAGCGCT GGATTAGGAG CCGAACAAAC GCTTGAGCAT TTTTTGGCCC GCTACAGCGA TACATTAACT GGTAGCACTG GTCCGCGCTA TTGGGGCTTC GTCACTGGCG GCGCAACTCC GGCAGCACTG GCAGGCGATT GGCTGGTCAG CACCTTCGAT CAGAATCCAA GTGGCACAAC CGAAACCGCC GCGATTCGGG TTGAAAACGA AGCCATCAGC ATGTTGCGCG AACTCTTTGG CTTGCCCACA AGCTTTAGCG GCGCATTCGT TTCTGGGGCA ACGATGGCCA ATTTTGTCGG CTTGGCGATT GGGCGGCAAT GGGCGGCTCA ACAACTCAAC CATGATGTTG CCCGCATGGG TTTATATGGG CTTGCGCCAA TTCCAGTTTT GAGCGGAGCA CCGCACTCAA GCATTTACAA GGCCATGTCA ATGTTGGGCA TGGGTCGTCA ACAGCTGCAA ACAATCGCCT TACAGCCCGA ACGCGAGGCG GTTGACATCG CAGCATTACG TCAAGCACTT CAAGCCTTGT CAGCGAACCA ACCTGCGATC GTTGTTGCCA ATGCAGGCAC GGTCAATAGT GTCGATTTTG ACGATCTTAT GGCAATTGCC GCGCTCAAGC AGGAATTCAA TTTCTGGTTG CATGTTGATG CGGCTTTTGG TGGTTTTGCC GCCTGTTCGC CGCGCTTTGC TCATTTAGTG CATGGGCTTG AACAAGCCGA TTCGCTGACG ATTGATGCCC ACAAATGGCT CAATGTGCCG TATGATTCAG CTATGCAATT CACCCGCCAT AGTGCCTTGC AAGTTGAGGT GTTTCATAAT AGCGCGGCCT ACCTCAGCCC AATTGGCGAG AATCCAGGCT TTTTTCATCG CACGCCCGAA AATTCACGCC GTTGGCGAGC ACTGCCAGCA TGGTTCACGC TTATGGCCTA TGGCTCGGCT GGCTATCAAG AAATGGTTGA GCGCGATTGC GATTTAGCCC AACTGCTGGC TAGCCATATC AGCGATTCAC CGTTGTTTCG CTTGGTCGCG CCTGTGCGCA TGAACGTCGT TTGTTTCACT TTGGCGGGCA ATCCTGATAG CACTACAATT CAGGCTTATC TTGATGCAGT ACGGGCTAGC GGAGCAGTTT TTATGACCGC GACTGTCTAT GCTGGACAAC CAGCGATTCG CGCGGCCTTC TCAAATTGGC GCACCACCAC CGCCGATGTT GGGCTGGCTT GGCAGGCAAT GGAGCGAGTC GCCATAGAAC ATAGAGCATA G
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Protein sequence | MHPVLAHDAA QIDHILAQTL ATAKQFLHDL PQRPVGVAPQ SHQPSQLPSA GLGAEQTLEH FLARYSDTLT GSTGPRYWGF VTGGATPAAL AGDWLVSTFD QNPSGTTETA AIRVENEAIS MLRELFGLPT SFSGAFVSGA TMANFVGLAI GRQWAAQQLN HDVARMGLYG LAPIPVLSGA PHSSIYKAMS MLGMGRQQLQ TIALQPEREA VDIAALRQAL QALSANQPAI VVANAGTVNS VDFDDLMAIA ALKQEFNFWL HVDAAFGGFA ACSPRFAHLV HGLEQADSLT IDAHKWLNVP YDSAMQFTRH SALQVEVFHN SAAYLSPIGE NPGFFHRTPE NSRRWRALPA WFTLMAYGSA GYQEMVERDC DLAQLLASHI SDSPLFRLVA PVRMNVVCFT LAGNPDSTTI QAYLDAVRAS GAVFMTATVY AGQPAIRAAF SNWRTTTADV GLAWQAMERV AIEHRA
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