Gene Haur_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1238 
Symbol 
ID5733146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp1442169 
End bp1442798 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content52% 
IMG OID641278378 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001544014 
Protein GI159897767 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGATC AGTTTTTACG CCAACCCAAA GAGCAATTAT TAGCCCCAAT CGCCCAACGG 
CTCCAGCGTG TACACCCAAC TACTATCACT TTGGCAGCCT TTGGTTGCGG CTTAGCAGCA 
GCAATCTGCG CTTGGCAACA AGCGTATTGG GTCAGCTTTG GCTGTTGGCT ACTCAATCGG 
CTACTCGATG GGCTTGATGG CACAGTGGCG CGGCTGAGCA ACCAGCAAAG CGATTTAGGT 
GGCTACATCG ATATTCTGCT TGATGTGATT ATTTATGCGT TGCTACCAAT TGGCTTGGTG 
GCGGGACAAC CAACGCTTGG CAACGCCTTG GCCGCTGTTG GCCTGATCAG CAGCTTTTAT 
GTCAATGCAA TTTCGTGGGC CTATTTGGCA GCAATTTTAG AAAAACGCCA ACAAGGCGCT 
AAAGCCCAAG CCGCCATGAC CAGCATTGCC ATGCCCAGTG GCTTGATCGA AGGCACTGAA 
ACAGTATTGT TCTTCAGTTT GTTTATTGCG CTCCCCAACC ACCTGAGCCG CTTATTTCAG 
CTGATGACGG CCTTAGTTGT CGTTACGATT GGCCAGCGCT TGCTTTGGGC CAAACGCTAT 
CTTCGCGAGG AACCACGCCA TGACCACTAG
 
Protein sequence
MVDQFLRQPK EQLLAPIAQR LQRVHPTTIT LAAFGCGLAA AICAWQQAYW VSFGCWLLNR 
LLDGLDGTVA RLSNQQSDLG GYIDILLDVI IYALLPIGLV AGQPTLGNAL AAVGLISSFY 
VNAISWAYLA AILEKRQQGA KAQAAMTSIA MPSGLIEGTE TVLFFSLFIA LPNHLSRLFQ 
LMTALVVVTI GQRLLWAKRY LREEPRHDH