Gene Haur_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1237 
Symbol 
ID5733145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp1441469 
End bp1442179 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content49% 
IMG OID641278377 
ProductSNARE associated Golgi protein 
Protein accessionYP_001544013 
Protein GI159897766 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACTA GCACATCAAC ATCGACCAAA TCGTTTTGGC AACGCCATTG GCAAAAATTG 
CTCGCTGCGG GGTTTTGGGT GTTGCTGGTG GGCGGCTATC TCTGGTATTC ATGGCGCAAT 
CAGCTTTCAC CAGCGGCGGC AGTTGGTCAA TTAATCGAGC TGCTCAAAAG CGATGTGGGT 
GTATTGATTT ATATTGGCGT GTACCTATTG CGCCCGTTGA TTTTCTTCCC AGCGACATTT 
TTGACGCTTG CTGGCGGCAG TGTCTTTGGC AGTGTTTGGG GTTTGATTTA CACCGTGATT 
GGGGCCAATG GCTCGGCGCT GGTGGCCTAT ACGATTGGGC GGTTTTTCGG CCAGCCCGAA 
CAAAACCAAA ATCAAACCGG CCTCGTAAAT GGCTATATCG AGCGTTTACG CCGCAACAGC 
TTTGAAACAA TTATGTTGAT GCGCTTGATC TTTTTGCCCT ACGATTTAGT AAATTATCTG 
GCGGGTATTT TACGGATCAA CTGGAAGCAA TTTTTGTTGG CAACCATGCT TGGATCGTTT 
CCTGGCACGC TAACCTTTGT GCTGTTTGGG GCATCGTTCG AGGGCGATTT TGCCAAAGCT 
GAGTTTTCGT TCAATCCATG GGCCTTTGCT GGCTCGATCG TTATTTTTAT CATCAGTATC 
GCGATTTCGC GCTGGCTTAA GCGCCGTGAA GCCGCTAAAC CAGCGGCCTA G
 
Protein sequence
MTTSTSTSTK SFWQRHWQKL LAAGFWVLLV GGYLWYSWRN QLSPAAAVGQ LIELLKSDVG 
VLIYIGVYLL RPLIFFPATF LTLAGGSVFG SVWGLIYTVI GANGSALVAY TIGRFFGQPE 
QNQNQTGLVN GYIERLRRNS FETIMLMRLI FLPYDLVNYL AGILRINWKQ FLLATMLGSF 
PGTLTFVLFG ASFEGDFAKA EFSFNPWAFA GSIVIFIISI AISRWLKRRE AAKPAA