| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1231 |
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| Symbol | |
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| ID | 5733139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1425804 |
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| End bp | 1428953 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641278371 |
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| Product | NHL repeat-containing protein |
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| Protein accession | YP_001544007 |
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| Protein GI | 159897760 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.001634 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAAC GACAGTTTCA TGCGCGGGTG GTTGTGATGA TAGTAATCTT CAGTCTGTTG
GCTGGTGGAT TGCTGTTGCA ACCAACGATC CATGATGCAG CCGCCCAAAC GCGCTCAACA
GTTCAATATA GTTATAATCC TGAGCGGCAA CATGTGCATT CTGGGAGCAT TAGTTTTTTT
CGCCAAACGA TTTTTAATTC AAGTTCGGCA TTAACTGGCG CTTCGTTGTT CGATAGCCCA
ACCGGGATGA TCTTCGGCCC TGATGGGCGT TTGTATGTTA GCCAATTTAA TGGGCGAATT
TTTGCAATTA CGCTCAACCC AACCAACCAT CAAGCTACCG CCGTTCAGGT GATCGAAACA
ATCTACAATT ATCCTAATAC TAACGATGAT GGTTCGCCCG CCACGGGCGT AAATGGTCGT
CAGTTGATTG GGATTTTGTT TGATCCGGCT TCAACGCCAT CGAATATGAT TTTGTATGTT
TCGCATAGCG ACCCGCGCTA TGGCTACAAC AGCGACACAA CCTCGCAAAA AATCAACACC
CGCTCAGGCA CAATTAGCAA ATTGGTCAGC ACCAATAATT TTGCCACCTC AACCGATATT
ATTAAGGGTT TGCCGCGCTC ACGTGAAAAC CACAGCACCA ACAGCATTGT TTGGGGGCCA
GATGGCTGGA TGTATATTTC GTCGTCGAGC AATACCAACA ATGGTGCGCC AAGCGCTCAC
TTTAGCAATT TGGCCGAATA TTATCTCTCG GCGGCAATTT TGCGAGCCAA TGTGCGCGAT
GCTGGCTTTC CTTCAGCAGG CATTGATGTC AAAAATGTCA ATAATGCGGC GGCGTTAGCA
CCATTTGCTG GCCAATTTGA GATGTATGCG ACTGGCTATC GCAATGTTTA TGATTTTATT
TGGCTGAATA ATAAGTTTTA TGCCAATGTC AATGGTGGCA ATGATGGCTA TGGCGATACG
CCGAGCGCCG CTCAATGCCC TGGTGGGGTG GAAATTAACC CACGCTATTT GCCCGATACC
CTGAAAATTG TGACCCAAGG TTCGTATGGT GGCCATCCCA ACCCAGCGCG TGGCGAATGT
GTTTTGAACA ATGGGAATGC CCAAGGCTTG CCAACGCCAC CAAACTACAA TCCACCAGCC
TTGACCTATG ATTTCCGCCC ATCCACGAAT GGGATTACGG CGTATATCAG TAATGCCTTT
GGCGGTGCGT TGCAAGGCAA TTTGATTGTC GCAACCTATG GCCAAAATCA AGATGTCAGC
CGCGTTCAGC TTGATGCCAA TGGCAACCCG ACTGGCATCC AAACCTTGGC AAAGTTCAAC
CAACCGCTTG ATGTGGTGAC CGATGCCAAG GGTGTGATTT ATGTGGCCGA ATTTGGCAGC
GATGCGATTA CCATCCTTGA GCCAGAAGAT TTGCCCAATT GTCCGCCGCC GCCGCCCTAT
TCGAGCATGG TCGATAGCGA TAATGATGGC TACTCGGATT TTGATGAAGA TCAAAATGCA
ACCAATTTGT GTAGCCGAGC CAGCGTACCC AACGATTTCG ATGGCGATAT GATTTCCGAT
TTGACCGATC CCGACGACGA TAACGATGGC ATCCTTGATG TCAATGATCA GTTGTATTTT
GATCCAGCGA ATGGCAATAA CACCAAATTG CCCGTTGAAT TCAATTGGAA TCCTGGTGAT
GCACCGTTGG GCAAAGTTGC TAATACGGGC TTTACTGGGG TGCAAATTAC CAATGGAGTT
ACGCGAACTG ATGAGGTTAA GATTGCAGTT GGCGCTGCTG GTGGCTTTAC CAACATCATC
ACCACCGAAG GCACAAATGC TGGTGCGATT AATACCCAGG CCAACGCTTT GCAAATTGGC
TTTGATCCCC ATCGCAACTT CCGAGTTGAA ACGCGGATCA CTGAAATGTT CCTTGGGCGC
ACGCCTGAGG GCGATCAAGC GGCGGGCTTG TTCTTCGGCC CCAACCAAGA TAACTATGTG
AAATTGGTGG CGACGGCCAA TTTGAATGGC GATGGCACAA GTGGCGACAC CGGGCTGCAA
TTTGCCATGG AAGTGGCCGG AAACTTGCAA ATCAATCCAA CCAATAATAA TCCAAGCATG
GTATTGCCAG GAGTGAGCAA TATCGACCTG CGCTTAGACG GCAATCCTGC TGCGCAGACC
ATGACCGCCT ATTATAAAAC TGATGGTGGC AACTGGACAG CAATTGGCAC GATCAATGTG
CCTTTGTGGT TCTTTAATAC CGGAACACCA GCAGGAATTT TGGCAACTAA TCATGGAACA
CCAAATACCA TCTCATTTAT TTTCGATTTC TTCCGTTTGA GTTATCGCGA TATTGTGGCG
CGGATCAACG GCGGTGATCG CGATTGGACG ACCAACGACG GAGCTGCTTG GAGTCCTGAT
ACAAGTGCCA ACCGTCCATA TTCAACTGGC GGCGGCACCT ATGTCTTGAT TCCAGGCGTT
TCGTGTCCCC AAATCTACAA CGTGACTCGT GACTTTGATC GGTTGTACTG CTCTGAACGC
AACACCAGCG GCTCGGCGGT GCAATACACA ATTCCGGTCA GCAGCACAGG AACGTATGCG
GTGCGCTTGC ACTTTGCCGA ACTGTATTGG GGCACGAATG GTCGGCCTGG GCCGAACCAG
CGTAAATTCA ATGTTCAGCT TGAAGGCACG ACTGTGTTGA CCAATTTCGA TATTTTCAGC
GAAACTGGCG CAACCTTCCG GCCAATTACC AAGACCTTTA CCACCAATAT TACTGATGGT
GCGGTCAATA TTAGTTTGCC CACGGGCCAG CCTGGCAATG TTGATCAAGG CAAGATTTCG
GCGATTGAGG TTTGGGGGCC AATTCTCAAT ATTGCCAATG TTACGCCAAC GGTCACGCCA
TCGCCAACGG CAACCAATAC GCCATCGCCG ACGGCAACCA ACACGCCAAC TAATACCAAT
ACGCCAACAA TCACGAATAC ACCGACCAAT ACCAATACGC CATCGCCAAC ATCGACTGGC
ACGGTGACGG CGACCTTTAC ACCGACCAAC ACGGCCACGC CAAGTAATAC GCCGACCAAC
ACGCCAACCG AAACCGTAAC GCCGAGCGCT ACGGCAACCC AAGGCACGGC GACCTATCGA
ATTTGGCTGC CGTACACTGT CAAAAACTAA
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| Protein sequence | MIKRQFHARV VVMIVIFSLL AGGLLLQPTI HDAAAQTRST VQYSYNPERQ HVHSGSISFF
RQTIFNSSSA LTGASLFDSP TGMIFGPDGR LYVSQFNGRI FAITLNPTNH QATAVQVIET
IYNYPNTNDD GSPATGVNGR QLIGILFDPA STPSNMILYV SHSDPRYGYN SDTTSQKINT
RSGTISKLVS TNNFATSTDI IKGLPRSREN HSTNSIVWGP DGWMYISSSS NTNNGAPSAH
FSNLAEYYLS AAILRANVRD AGFPSAGIDV KNVNNAAALA PFAGQFEMYA TGYRNVYDFI
WLNNKFYANV NGGNDGYGDT PSAAQCPGGV EINPRYLPDT LKIVTQGSYG GHPNPARGEC
VLNNGNAQGL PTPPNYNPPA LTYDFRPSTN GITAYISNAF GGALQGNLIV ATYGQNQDVS
RVQLDANGNP TGIQTLAKFN QPLDVVTDAK GVIYVAEFGS DAITILEPED LPNCPPPPPY
SSMVDSDNDG YSDFDEDQNA TNLCSRASVP NDFDGDMISD LTDPDDDNDG ILDVNDQLYF
DPANGNNTKL PVEFNWNPGD APLGKVANTG FTGVQITNGV TRTDEVKIAV GAAGGFTNII
TTEGTNAGAI NTQANALQIG FDPHRNFRVE TRITEMFLGR TPEGDQAAGL FFGPNQDNYV
KLVATANLNG DGTSGDTGLQ FAMEVAGNLQ INPTNNNPSM VLPGVSNIDL RLDGNPAAQT
MTAYYKTDGG NWTAIGTINV PLWFFNTGTP AGILATNHGT PNTISFIFDF FRLSYRDIVA
RINGGDRDWT TNDGAAWSPD TSANRPYSTG GGTYVLIPGV SCPQIYNVTR DFDRLYCSER
NTSGSAVQYT IPVSSTGTYA VRLHFAELYW GTNGRPGPNQ RKFNVQLEGT TVLTNFDIFS
ETGATFRPIT KTFTTNITDG AVNISLPTGQ PGNVDQGKIS AIEVWGPILN IANVTPTVTP
SPTATNTPSP TATNTPTNTN TPTITNTPTN TNTPSPTSTG TVTATFTPTN TATPSNTPTN
TPTETVTPSA TATQGTATYR IWLPYTVKN
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