Gene Haur_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1227 
Symbol 
ID5733120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp1419801 
End bp1420820 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content52% 
IMG OID641278367 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001544003 
Protein GI159897756 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTAC AAAATGATAC TCTGCTCGAT ATCAACGGCT TAAAAATGCA CTTCCCGGTC 
AAATCCAACG GTTTATTACG CCGCACGATC GGGGCAGTTA AGGCAGTTGA TGGCTTGAGC 
TTTTCAGTCA AACGCGGCGA GACGCTGGGC TTGGTCGGTG AATCAGGCTG TGGCAAATCG 
ACAACTGGGC GGGCAATTTT GCAGTTGCAT CGCCCAACCG CTGGCACGGT AAGCTTTGAT 
GGCACGGACT TGACCAAACT CAAAGGCGAG GCCATGCGCC AAATGCGCCG TAAAGTCCAG 
ATTATTTTCC AAGACCCCTA TGCTTCGCTC AACCCGCGCA TGACCGTTGG CGATATTGTG 
GGTGAGCCGA TTCGGGTGCA TGGCCTGCGC ACTGGTAAAG AGGTGCGCAC GCGGGTTGAG 
GAATTGTTGC GCGTCGTGGG TCTCAATCCT TATTTTATCA ACCGCTACCC GCATGAATTT 
TCGGGCGGTC AACGCCAACG GATTGGGATT GCCCGTGCTT TGGCGGTCGA GCCGGATTTT 
ATCGTCTGCG ATGAGCCAGT TTCAGCGCTC GACGTGTCGA TTCAAGCCCA AATTATTAAT 
TTGCTGCAAG ATTTGCAAGG CCAATTTGGC TTGACCTATC TGTTTATCGC CCATAATCTG 
AGCGTGGTCA AGCATATCAG CGATCGGGTG GCGGTGATGT ATTTGGGCAA AATGGTTGAG 
TTGGCTCCCT CAAAAGAGTT GTATGCCAAC CCGATGCACC CCTATACCCA AGCTTTGCTC 
TCAGCTGTGC CGATTCCTGA TCCTGAGGTC GAAAAGCAAC GCCAGCGAAT TATTTTGCAA 
GGCGATGTGC CCAGCCCGCT TAATCCGCCG ACTGGCTGTC ACTTCCATAC GCGCTGCCCG 
ATTGTGATTG ACAAATGCAA AGCCGAAGAT CCACCCTTCC AAGATTATGG TGGCGGCCAT 
TTTGTGGCTT GCTGGCGGGC AACTGAGTCG CAAGAACAGA TGAATTTGAA GTTGCAGTAG
 
Protein sequence
MAVQNDTLLD INGLKMHFPV KSNGLLRRTI GAVKAVDGLS FSVKRGETLG LVGESGCGKS 
TTGRAILQLH RPTAGTVSFD GTDLTKLKGE AMRQMRRKVQ IIFQDPYASL NPRMTVGDIV 
GEPIRVHGLR TGKEVRTRVE ELLRVVGLNP YFINRYPHEF SGGQRQRIGI ARALAVEPDF 
IVCDEPVSAL DVSIQAQIIN LLQDLQGQFG LTYLFIAHNL SVVKHISDRV AVMYLGKMVE 
LAPSKELYAN PMHPYTQALL SAVPIPDPEV EKQRQRIILQ GDVPSPLNPP TGCHFHTRCP 
IVIDKCKAED PPFQDYGGGH FVACWRATES QEQMNLKLQ