Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1224 |
Symbol | |
ID | 5733117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1416654 |
End bp | 1417661 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641278364 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001544000 |
Protein GI | 159897753 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGGCT TTATAATTCG TCGCGTCTTG GCGATGATTC CGGTGTTGTT TCTCGTGGCA CTCATTACTT TTTTTATGAT GAAACAGGCC AAAGGTGGGC CATTTGATCA AGAAAAGGAA GTTGCCCCGT CAACGATTGC CCTGCTGAAT CGCAAATTTG GTTTAGATAA ACCCGCTTGG CTCAATTCGG CAGAATTTAG TAATCGCTTG AGTACCGAAG GTAACCCCTT TTTGGCGCTG CGTGGCTTGT TCGATAGCCA ATTTGGCAAC TATCTGATCA ATGCCGTCCA AGGCGATTTA GGCCCCACCT ATGCTTCGAA AGGCACCGAA ACAGTTCAAG ATAAAATCAA AGAAACGTTT CCAATTTCGT TGCGCCTTGG CATGATTTCG TTGGCCTTTG CGCTGTTGGT GGGCTTTCCC CTCGGCATTT TGGGGGCTTT GCGCCAAAAT ACGATCTTCG ATTACTTTAG CCTGATCATC TCAACCATCG GCTTTTCGGT GCCAACCTTT GTAACTGGTT TGCTATTGCT GCTGGTTATG AGCAAGGTGT TTGATGTTGC TCCGATCAAA GATCCCTCGG TTTGGCAAGG CTTTAGTACC TCGTATATTC CACCAGCAAT CATTTTGGGC TTAGGCACAA TGGCTTATAT TACTCGTTTG ACCCGCAGTA GTGTGCTTGA GGTCAAGCGT CAAGATTATA TTCGCACTGC TCGGGCTAAA GGTCTCGGTG ATCGTGTGGT GATTTTGCGC CATATCTTGC GCAATAGCTT GATTCCAGTA ATTACGATTC TCGGTCCAGC AGTGGCGGGC TTGGTAACTG GCTCATTTAT TATCGAATCA GTTTTCCGTG TGCCGGGCAT TGGCAGTGAA TTTATTGGAG CAATTGGCAG CCGCGATTAC TCGATGATTA TGGGTTCAAC CCTGTTTTTC TCATTGCTGG TGGCTTTAGG CAATATTATG GTCGATCTTT CGTATGGCTT GATTGATCCG CGGATTCGTA ACAGCTAG
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Protein sequence | MIGFIIRRVL AMIPVLFLVA LITFFMMKQA KGGPFDQEKE VAPSTIALLN RKFGLDKPAW LNSAEFSNRL STEGNPFLAL RGLFDSQFGN YLINAVQGDL GPTYASKGTE TVQDKIKETF PISLRLGMIS LAFALLVGFP LGILGALRQN TIFDYFSLII STIGFSVPTF VTGLLLLLVM SKVFDVAPIK DPSVWQGFST SYIPPAIILG LGTMAYITRL TRSSVLEVKR QDYIRTARAK GLGDRVVILR HILRNSLIPV ITILGPAVAG LVTGSFIIES VFRVPGIGSE FIGAIGSRDY SMIMGSTLFF SLLVALGNIM VDLSYGLIDP RIRNS
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