| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1217 |
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| Symbol | |
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| ID | 5733110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1403614 |
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| End bp | 1409247 |
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| Gene Length | 5634 bp |
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| Protein Length | 1877 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641278357 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001543993 |
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| Protein GI | 159897746 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1956] GAF domain-containing protein
[COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAGTG GACTGACTGA TACCGCATTG AATAGCATTC GGCTCAAGCG TATTTTACGC
TTTGGGATTT TTACCATGAT TATTGGTGTA ATCATGGCCG TACCCTATGG CCTAGAAGCC
TTGCGCCTGC CATCGTGGCA AAACTACATG AGCATCATCA GCATTGTTGT GGCCGCAATT
GGTGGTTTGT GTGCCACAGT GTCTGCCAAA AAAGGCTGGT TGATTGCTGG CGCATACAGT
TTAATTGTCT CAATTGCTGT TGCCACTTTT CCGAGCCAAC TCTTTATTGC TGAGTTTGGC
TTCATGCTCT CAATTCTGAA TGTGTTCTTT GTGCTGGTGA TCTCGATCCA AACCCTGCCT
GAACGCCATA TCTTTCCGGT TATCTTGGGC ACGATTAGCC TTGGCGTGAT TGCCACCTTG
CTCAAAACCT TTTTGAATAT TCAAGAGGTG CGGGTTTCGG GCAGCCAAGA AATCTACATG
CCTTTGATGA GCATTGCGGC AATTGCCATC TTGCTTTTCT TTGTGTTTCG CGAATTTGGC
ACACTCTCGA TTCGTAACAA AATTCTGATC TCGTTTGTCT TGGTAACAAC CCTACCAATT
GCGATTATTT CATTTATTAC CTTGCGCTCA ACCCGTGATT CGCTCACAAA TCAGGCCAAT
AGCTTGATTT TGGTGAATGC TACTAATATT GCCAACGAAA TTGATGATTT TGTTAATCGG
AATATTAACC GGGTCAGTGC ACTCTCGCGG ATTCCTGAAT TAAGCGAATA TTTGTTGGCT
GCCGAACAAA ATACCTTGGT TCCTGATCAA GATCGCGATA CGCGTAATTT GTTCCGTGCA
GTTACCACCG AAAATAACGA TACACTCTCG GTTGCATTGT TGAATAATCG TGGCGTGGTC
TTGGTCGATA CCGTGCCAAC CAACGTCGGG GTAAACGATT CAGGACTTTC ATATTATCAA
GATGCAATTC GCACAGGCCA GAGCATTATC TCACCAGTAA CCTTCGGTAA TGATAACCTG
CCTTCAATTT ATTTCAGTAC GCCCGTTCGT AACCCACAAA GCCAAGAAAT TATCGGTGTG
CTGCGGATTC GTTATAGCGC CAGTATCATT CAATCATTGG TAGCCCGTAG TAATGACCGC
GCTGGTCAAA ACTCGTTTGG GATTGTGCTT GATGAATATG GTATGCGAAT TGCGCAGGGC
AGCGAATTAA CTCTCTTGTA TAAAATTGCC GATACTTTGC AGCCTGATGA AATTAAACGC
TTGCAAGATG AACGGCGTTT GCAAAATATT AATGCAGAAA ATCTGCTTGT GCCATATCCT
GAATTAATCG GTGCAATCAA AGCAATTGTG CTTGATCCAC AAAGTAATGG CGAAGTGATT
TCGATTTCGA GTACGATTCC TGAACAGGAT AAACCTGGCG ATCCCGATCC TGAAGGCAAT
GATATTTATG CCTACACCGC TACCAAAACT GTGCCATGGC GGATTCTCTA CCATCAAAGC
GAAGCGACCT TCTTAGCGCC AATTCGCCAA TCGGAGCGCT ATACAACCTT GATTGTGTTG
GCGCTGTTGG TTGGGATTAG TATGATCGCT GTGTTTGCAG CGCGAATTTT GACGAATCCA
ATTGAGCGTT TGACTGAATT TGTTGAACGT TTCCGCCAAG GCGATTTATC AACCCGTGCC
CCAGTTAGCT CGCAAGACGA AATTGGTCAA TTGACGACCA CCTTTAATAG TATGTCTGAT
CAGTTGCAAG AAACTCTGCA AGGTTTGCAA CAACGCACAA TCGCTTTGGA AACCTCCAAC
GAGGTCAGCC GCCGACTTTC AACGATTTTG AACCCCAATC AATTGGTGTT GGAAGTGGTT
GAGCAGCTTA AAAATACCTT CAACTACTAT CACGCCCACA TTTATTTGGT TGATCAACAG
ACCAATGAGT TTGTGATGAT GGGTGGTACG GGGCAGGCTG GCCGCACCTT GCTTGCGCGG
AATCACCGTA TTCCGCAAGG CCGTGGTTTG GTTGGCCGCG CTGCCAATAC CAAAGATGTG
GTGTTGGTGC CCGATGTCAG CCGTGAAGCT GGCTGGTTGG CCAACCCCTT GCTCCCCGAA
ACCAAGGCTG AAATTGCTGT GCCAATTATG CTGGGCGATG AAGTGCTTGG CGTGTTGGAC
GTGCAAAATG CTGAAGTTAA TTCGCTAACC AATGATGATG CAACCTTGCT CCAATCGATT
GCCGCCCAAG TGGCGGTTGC TTTGGAAAAT GCTCAATCGT TTGAAGAAAT TACCCGCACC
CAAGAACTCT TGCGAATTCG TGAACGGGCG ATCACCGCTA GTAACGACGG GATTGTGATT
GTCGATCCAC ATCAGTTTGA TATGCCAGTG GTGTATGTTA ACCCAGCCTT CGAACGAATT
ACGGGTTACA CACCTGAAGA AATAATTGGC AAGAATTGTC GTTTCTTGCA AGGTGATGAT
ACTGACCAAC AAGGCTTGCG TGAGTTACGC CATGCAGTGC GTGAAAAACG CGCTACACGG
GTGCTCTTGC GCAACTATCG CAAAGATGGC AGTTTGTTCT GGAATGAACT CGATATCAAC
CCAGTATTTG ATGAAAACGG TGAGTTGATC AACTTTATCG GGGTTCAACA AGATGTAAGC
GAACGGGTCG AGGCCCAACG AGCCTTGCAA GAATCCTTAG GCTTCCAAAA GACCATGGTT
GATAGTGCCA GCTATATGAT TATCTCAACG ACGGTTGATG GCCAGATTAC CTCTTTCAAC
CGTAGTGCTG AGGTTGCACT TGGCTATAGT GCGCACGATA TGGTTGGCAA GAGTCCCGCA
GGCGCATTTC ATGATCAAGC TGAAGTGATG CAACATACTG AAGCGTTACG AGCAAAACTC
GGCTATGCAA TTGAGCCGTT TGAGGCAATT GTGTATGAGG CCAAACAAGG TCAACCTTCG
GTTAAGGAAT GGACGTATAT TGCTCAAGAT GGCCGTCGCT TCCCAGTCCA GCTTTCAATT
ACTGCTTTGC GGGATCAACA AGGGAATGTC ACTGGCTATT TGGGAATTGC CAATGATATT
AGTGTCCAAA AGCAACAGGA ACAAGCCTTG CGAGATAGCG AAGTCCGCTA TCGTTCCTTG
GCTGAGTCCT CGCGTGACGT GGTGTTTATT TTCGACCGCG AACATCGTTT GCAATATATC
AATGAATTTG CGGCGGGAAT CTTCAATCGC ACGCCCGCTG AACTGATTGG TTTGCTTGAT
GAGCAAATGC TTACCCCGGC TACGGTAGAA TCGCGACGGG CTGATGCCGA GATTATTTTC
AGCACTGCCC AAAACCTCAA TCGCGAATCG ATGTTTATGG TCAATAATGA GGAAACTTGG
TTCGACTTCC AATTGCTGCC AATTATGGAT GATCAAACCA GCAGTCCCGA ATTGATTATG
AGCGTTGGCC GTAACATTAC CGACCGCAAG CGCGATGAAC AAGAACGCGA GCGCAACTTG
GTTGAAACTG ACCGCCAACG TCGGACGCTA CAAGGGATTC TCGAAGCCCT GCCGGTTGGT
GTAGTGGTTT ACAATGCTGA CTTTGAGATG CAGCTTCAAA ATCAAAGTGC CCAATTGATC
GTCGGTCAGC CGATTGGCGA TGTGAACCCC GATGCAATTG ATACAGTTGG TGAAACCTAC
CAACTTTTTA TTCCTGGCAC TGAAACCGCG TTTGATCCGA ACGATATTCC AGTGTTTCGG
GCAATTCGCC ATGGAGAACA TGCCCAAGCT GAATTTGATA TTGCCCATCC CGATGGCCGC
CGTTTTACGG TCTTGGCCAG CGGTGCGCCG GTGTTCAACA GCGAAGGCCA AGTTATCAGC
GGGATTGCAC TCTTGCAAGA TATTACTGAC CGTAAACTCA ATGAGCAAGA ACGTGAACGC
CTGCTGCAAG CCACGATCGA GCAAGAACGC TTGCTCAAGG CGATTCTCGA TAACATGCCG
ATTGGGGTTT ATGTGGTCAA TAGCAAGGGT GTCAGCCAGA TGATCAATCG ATCGACGATT
GAGATTTTGG GGGTATCTGG CCAAATGGGC GCGGCGGTCT TAGACCAATC CGATTTGCCA
CGACCTAAGT TCTTGTATGA GGGTACTGAG AAGGAATTAG ATGTCCACGA TACTGGTTTG
TTCAAAGCGT TATCGACTAA AAAACCATCA CGCGAGTTGG TGGATGTGAT GCGCTTTGAT
GGCAAACGGG TTTCGGTCGA TTCGGTCGCT GTGCCAATGT TCGATGATCA ACAACAACTG
ACTGGCGTTC TTTCGCTGAT TCAGGATGTC ACTGAACAAC GCAATGCTCA ACGTGAGCGT
GAGCAATTAT TGAGCCAAGT GGAATATCGG GCACTCGAAC TAGAAACGGT GGCTCAGGTC
AGTACCTCGG CGGCAGGTTT GTTGAATGTG GAAGAACTGC TGCAAACCGT GGTTGATCTG
ACCAAACATC GTTTCGGTCT CTACCATGCC CACATCTACC TGTATAACCC TGAGAGCCAA
CTCTTAGAAT TAGCCTTCGG TGCTGGCGAA ATTGGTCGCA CCATGGTCAA GGAAGGCCGC
ACGATTCCAT TAGATCGTGA GCAATCATTG GTGGCCCAAG CTGGGCGGGC ACGGCGCTCG
ATTATTGAAA ATGATGTGCG TTCGAACCCA AGTTTCTTGC CGCACCCGCT TTTGCCCGAA
ACCCGTGCTG AAATGGCGAC TCCGCTGATT GCTGGTTCGA TGCTGCTCGG TGTGCTCGAC
GTTCAATCCG ACCAAAGTAA CATCTTTACT GACGATGATC GCAAGATTCA AACCACCTTG
GCAAGCCAAA TTGCGATTGC CTTGCAAAAT GCTCGCTTGT TTGCTGAACA AACCGCGACG
ATGCAGCGCT TGCAAGAGCT AGACCAACTT AAATCAGCCT TCTTGGCGAA TATGTCGCAC
GAGTTGCGCA CACCGCTCAA TTCAATCCTT GGCTTTACCG AGGTGATTCT CGAAGGCATC
AACGGGCCAA TCAACGACCT GATTCATAAT GACTTGAGCA TTATTCATCG TAATGGTCGT
CACTTGCTCA ACTTGATCAA CGATATTCTG GATATGGCTA AGATCGAATC GGGCAAACTC
ACGCTGTTCC GCGAAACCTT CGATGTGGTT GAAGTGTTGC ATGAAGTGGC GAGCACGGTC
GGACCATTGG CTACGCAGAA ACATCTGGAG TTGCTGGTCG ATATTGAGCC AAATCTCAAA
TTGCCAGTCT ACGCCGACCG TTTCCGAATT CGCCAAGTAT TATTGAATAT CGTAGGCAAT
GCCTTGAAAT TTACCGAGCA AGGTTCGGTG ACAATAGGCA TTGACACAAC GCCAACGACC
CGTATGATTA AAATCCAAGA TACAGGCATT GGGATTCCGC TGGATAATCA AGATACGATT
TTCATGGAAT TCCATCAGGT CGATAATTCG ACAACCCGTA AGGCGGGCGG TACGGGCTTA
GGCTTGCCAA TTAGTCGCCA CCTTGTCGAA ATGCACGGCG GCAAACTTTC GATGGTTAGT
AGCGGCAATC CTGGTGAAGG CTCACTCTTT ACCATTGAAT TGCCAATCAA CGCCAGCGAA
GATGAAGTTA ATCCTAATGC AGCGCCAGCC AATCAACCTA TGTCTGTAGA ATAA
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| Protein sequence | MASGLTDTAL NSIRLKRILR FGIFTMIIGV IMAVPYGLEA LRLPSWQNYM SIISIVVAAI
GGLCATVSAK KGWLIAGAYS LIVSIAVATF PSQLFIAEFG FMLSILNVFF VLVISIQTLP
ERHIFPVILG TISLGVIATL LKTFLNIQEV RVSGSQEIYM PLMSIAAIAI LLFFVFREFG
TLSIRNKILI SFVLVTTLPI AIISFITLRS TRDSLTNQAN SLILVNATNI ANEIDDFVNR
NINRVSALSR IPELSEYLLA AEQNTLVPDQ DRDTRNLFRA VTTENNDTLS VALLNNRGVV
LVDTVPTNVG VNDSGLSYYQ DAIRTGQSII SPVTFGNDNL PSIYFSTPVR NPQSQEIIGV
LRIRYSASII QSLVARSNDR AGQNSFGIVL DEYGMRIAQG SELTLLYKIA DTLQPDEIKR
LQDERRLQNI NAENLLVPYP ELIGAIKAIV LDPQSNGEVI SISSTIPEQD KPGDPDPEGN
DIYAYTATKT VPWRILYHQS EATFLAPIRQ SERYTTLIVL ALLVGISMIA VFAARILTNP
IERLTEFVER FRQGDLSTRA PVSSQDEIGQ LTTTFNSMSD QLQETLQGLQ QRTIALETSN
EVSRRLSTIL NPNQLVLEVV EQLKNTFNYY HAHIYLVDQQ TNEFVMMGGT GQAGRTLLAR
NHRIPQGRGL VGRAANTKDV VLVPDVSREA GWLANPLLPE TKAEIAVPIM LGDEVLGVLD
VQNAEVNSLT NDDATLLQSI AAQVAVALEN AQSFEEITRT QELLRIRERA ITASNDGIVI
VDPHQFDMPV VYVNPAFERI TGYTPEEIIG KNCRFLQGDD TDQQGLRELR HAVREKRATR
VLLRNYRKDG SLFWNELDIN PVFDENGELI NFIGVQQDVS ERVEAQRALQ ESLGFQKTMV
DSASYMIIST TVDGQITSFN RSAEVALGYS AHDMVGKSPA GAFHDQAEVM QHTEALRAKL
GYAIEPFEAI VYEAKQGQPS VKEWTYIAQD GRRFPVQLSI TALRDQQGNV TGYLGIANDI
SVQKQQEQAL RDSEVRYRSL AESSRDVVFI FDREHRLQYI NEFAAGIFNR TPAELIGLLD
EQMLTPATVE SRRADAEIIF STAQNLNRES MFMVNNEETW FDFQLLPIMD DQTSSPELIM
SVGRNITDRK RDEQERERNL VETDRQRRTL QGILEALPVG VVVYNADFEM QLQNQSAQLI
VGQPIGDVNP DAIDTVGETY QLFIPGTETA FDPNDIPVFR AIRHGEHAQA EFDIAHPDGR
RFTVLASGAP VFNSEGQVIS GIALLQDITD RKLNEQERER LLQATIEQER LLKAILDNMP
IGVYVVNSKG VSQMINRSTI EILGVSGQMG AAVLDQSDLP RPKFLYEGTE KELDVHDTGL
FKALSTKKPS RELVDVMRFD GKRVSVDSVA VPMFDDQQQL TGVLSLIQDV TEQRNAQRER
EQLLSQVEYR ALELETVAQV STSAAGLLNV EELLQTVVDL TKHRFGLYHA HIYLYNPESQ
LLELAFGAGE IGRTMVKEGR TIPLDREQSL VAQAGRARRS IIENDVRSNP SFLPHPLLPE
TRAEMATPLI AGSMLLGVLD VQSDQSNIFT DDDRKIQTTL ASQIAIALQN ARLFAEQTAT
MQRLQELDQL KSAFLANMSH ELRTPLNSIL GFTEVILEGI NGPINDLIHN DLSIIHRNGR
HLLNLINDIL DMAKIESGKL TLFRETFDVV EVLHEVASTV GPLATQKHLE LLVDIEPNLK
LPVYADRFRI RQVLLNIVGN ALKFTEQGSV TIGIDTTPTT RMIKIQDTGI GIPLDNQDTI
FMEFHQVDNS TTRKAGGTGL GLPISRHLVE MHGGKLSMVS SGNPGEGSLF TIELPINASE
DEVNPNAAPA NQPMSVE
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