Gene Haur_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1213 
Symbol 
ID5733106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1397687 
End bp1398481 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content50% 
IMG OID641278353 
Producthypothetical protein 
Protein accessionYP_001543989 
Protein GI159897742 
COG category[S] Function unknown 
COG ID[COG2324] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTAGTC TACGTGTGGG GCATTGGGTT TGGGTGGGCT ATTTGTTTGT TTGGGCTTGG 
AGCGTGCCAT TATTGGCCTT TGATCTGGTG CCAGCTGGCG GCGAATTTAT GGCAACTGTG
ATGTTGGTTG TGCCAGGTGG GCTGACGGCG TGGTGGTTAA TTCAACGTTA TGGCAAGTTA
GGCTGGCTCA GCAGCATTAT AATTGCGGTT GGCTCATGGC TCACCGAGCA TCTTGGGGTT
ACCACAGGCT GGCCGTTTGG CGCATATCAA TATAATGGTG TGCTTTTGCC CGAAATTGTT
GGAGTTGTAC CATTGGCAAT TCCGTTTGCC TGGCTGTTGG TTGTGCCAGG CGCACTCGAA
TTAAGCCGGA TGCTGATGCC AAAAGTTGGT TTTTGGCCAA CGGTTTTAGG TGCTGCCAGC
CTTGCCATGC TGTTTGATTT GGTGATCGAG CCAGTCGCGG TGTATGTCAA TCGCTATTGG
ACATGGCTCG AAACTGGCCC GATGTTTGGG ATTCCCACCG CCAATTTTGT AGCGTGGTGG
GGCTTAGCTT TCATTTTAGC CTTGGCAACA GAAATGCTTG GACAACGCAC CAACAACCTA
CCCCAAAGCC CAAAACTCAA CTTGCCAATA GCGATCTATT TGCTCAATTT AGCGCTGTTC
ACAATTGTCA ATCTGACCCA TCAGCAATTG GCTGCGGGAG CTTTGGGTTT ATTATTGTTG
GCTGGTTTTG GCTGGCGCTT ACACCAACGC CAGATTGGTT GGCATTGGCG TTATGATCAA
CTAATTCAAC AATGA
 
Protein sequence
MASLRVGHWV WVGYLFVWAW SVPLLAFDLV PAGGEFMATV MLVVPGGLTA WWLIQRYGKL 
GWLSSIIIAV GSWLTEHLGV TTGWPFGAYQ YNGVLLPEIV GVVPLAIPFA WLLVVPGALE
LSRMLMPKVG FWPTVLGAAS LAMLFDLVIE PVAVYVNRYW TWLETGPMFG IPTANFVAWW
GLAFILALAT EMLGQRTNNL PQSPKLNLPI AIYLLNLALF TIVNLTHQQL AAGALGLLLL
AGFGWRLHQR QIGWHWRYDQ LIQQ