Gene Haur_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1206 
Symbol 
ID5733099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp1389785 
End bp1390204 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content49% 
IMG OID641278346 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001543982 
Protein GI159897735 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00151678 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATT CACTGGCGTT TTCACAGGCA ATTGCCATCA GCCTCTACAT CACCTATAAA 
ATCGAGGAAC AAATCTACGA TTTTGTGCCA ACCCATGAAA TCGCCGATTT TTTAGGTATT 
GCCAAGCCAA GCGTGGTTAA GGTTGTACAA TCGCTGACCA ATGCCGGCCT AATTGAAACC 
CGCGAGGGAG CGAAAGGCGG CGTGCGCTTA ACTCGTAACA GTCAGGCGAT TAATCTCTTG 
GATATTTTTA ACGCGATCGA GCAAGCCAAA CCCTTGTTTC GGCTGAATAT TCACCCAACC 
GAGCCGAAAA TCGAGGCACT AGCCGCCCGT CAACGTATGG TCGCCAGCCT GCAACGAGCC 
GAAGCAGCCA TGAAACAAGA GTTGCAAGCG GTTACCTTAG CGGATCTTTA TAGCGGTTGA
 
Protein sequence
MSYSLAFSQA IAISLYITYK IEEQIYDFVP THEIADFLGI AKPSVVKVVQ SLTNAGLIET 
REGAKGGVRL TRNSQAINLL DIFNAIEQAK PLFRLNIHPT EPKIEALAAR QRMVASLQRA 
EAAMKQELQA VTLADLYSG