| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1194 |
|---|
| Symbol | |
|---|
| ID | 5733087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 1376249 |
|---|
| End bp | 1377070 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641278334 |
|---|
| Product | formamidopyrimidine-DNA glycosylase |
|---|
| Protein accession | YP_001543970 |
|---|
| Protein GI | 159897723 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAAT TACCAGAAGT TGAAACCGTT CGTCGTTCGC TTGAGCAAGA GCTTGTTGGG
CGGTATTTTG TGGCATTGCG CAGCCTTGGC TGGCCCAAAA TTGTCGATAC CCATAGCCCT
GAATTGTTTG CCGAGGCTAT CGCCCAACGC CAGATTCAGC AAGTTCAGCG GCGGGCCAAA
TATTTGCTGA TCGAGCTTGA TAACCACGAA ACCTTGATTG TGCATCTGCG CATGACTGGC
CAAATGTTGG TTGTGGCTGC CGACGAACCT GCCGATCGCC ATACGCATGT GGTGGTAGCG
CTGGATAATG GCCGCGAACT ACGGTTTCAC GACCCACGCA AATTTGGCCG TTGGAGTCTT
GTTGATCGCA GTGGCGTGGC GGCGCTCAAT CAACGTTTAG GACCAGAGCC GCTTGGCGAC
GATTTTACTT TAGATGATTT TGCGCAACGC TTGAGTCGCA AAGCTACCAA AATCAAGCCA
ACCTTGCTTG ATCAAAGTGT CTTGGCGGGA GTTGGCAATA TTTATGCTGA TGAAGCGTTG
TGGTTGGCCA AAATTCACCC CTTGCGCTCC GCCAATAGCC TAAACGCCAA CGAAATTGCC
GAGCTATTCG AGGCGATTAA AACTGTACTG CGCAACTCAA TTGAGCATCG TGGCACAACC
TTGGTCAATT ATCGCGATGC CTATGGGGCA AGCGGCGAAA ACCAATATCA CCTTGAGGCT
TATGGACGAA CTGGCGAGCC ATGCCGGCGC TGTGGCACGC CAATCGAGCG CATCGTCGTG
GCCCAACGCT CTACCCATAT TTGCCCAGTA TGCCAAGCTT AA
|
|---|
| Protein sequence | MPELPEVETV RRSLEQELVG RYFVALRSLG WPKIVDTHSP ELFAEAIAQR QIQQVQRRAK
YLLIELDNHE TLIVHLRMTG QMLVVAADEP ADRHTHVVVA LDNGRELRFH DPRKFGRWSL
VDRSGVAALN QRLGPEPLGD DFTLDDFAQR LSRKATKIKP TLLDQSVLAG VGNIYADEAL
WLAKIHPLRS ANSLNANEIA ELFEAIKTVL RNSIEHRGTT LVNYRDAYGA SGENQYHLEA
YGRTGEPCRR CGTPIERIVV AQRSTHICPV CQA
|
|---|
| |