| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1191 |
|---|
| Symbol | |
|---|
| ID | 5733084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 1369675 |
|---|
| End bp | 1371558 |
|---|
| Gene Length | 1884 bp |
|---|
| Protein Length | 627 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641278331 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_001543967 |
|---|
| Protein GI | 159897720 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000300657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACCC AATTGAAGGG GGTTTTAGTG GGGAATCCGT TGGAGACTGC GGCCCAATCG
CATGAGCGCT TGGATAAAAA AACCGCGCTC GCAGTCTTCT CGTCTGATGC TTTATCATCA
GTCGCCTATG CCACCGAAGA AATGCTTGTC CACCTTGTGC CAGCCGGCAT CATTGCGTTT
AGCTCATCGC TGTGGCTGGG CATCGGCATC GCTGTTTTGT TGATGATCGT GACGATCTCG
TATCGCCAAA CAATCACGGC CTATCCCAGC GGTGGTGGCT CGTACATCGT GGCCTCGGAT
AATTTAGGCA CTCTTCCGGG TTTGATCGCT GGCGGTGCAT TATTAATTGA CTATATTCTG
ACTGTGGCAG TGTCGATCTC GTCGGGCGTT TCGCAGTTGA TCTCATTGGT CGAGCCGTTG
CGTGATTATC GAATTGAAAT TTGTTTGATT GGGATTCTCA TTCTGACCTT GGCCAATTTG
CGTGGGATTC GCGAATCGGG GGCGATTTTC TCGCTGCCTA CCTACTTTTT TATTACAGTC
ATTATGTTGA CCCTCGGCTA TGGCTTTTAC AAACAATTTA CAGGCGATAT TCAGCCGTTA
GTGCTTTCGG ATAACCTGAT GGGGCCACAT GAACAAAGCT TCTCGCCATT TGGAACTGAG
GCTATGACCG CCTTTTTGCT GATGGGCGCG TTTGCCTCGG GCTGTTCAGC ATTAACCGGG
GTTGAGGCAA TTTCGAATGG CGTACCAGCA TTTCGCAAGC CAGAGCCACA CAACGCTCGC
GTCACCATGG TTTGGATGGC GGGATTACTA TTAGTGATGT TCGCTGGCAT TACCTGGTTT
GCTCACAAGT ATGGCGCACG CCCGCAATTC AACGAAACCG TGATTTCGCA AATTGGGCGA
GGCATTTGGG GGCGCACGAC GGGCAGCGAA ACGGGCTTCC CCAAAGTGAT GCATGGCATG
TTGCAAATCT CAACCGCCGC AATTTTGCTG GTTGCAGCCA ATACCAGCTA CGCCGATTTC
CCACGATTGA TGTCGTTGTT GGCCCGAGAT GGCTTCTTGC CCCGCCAATT CTCATCATTG
GGCGATCGTT TGGTCTTCTC GAATGGGATT CTTTTCTTGG CGGTTGCTGC TGCACTGTTG
GTGATTGGTT TTGATGGCTC GGTTACCAAC TTAATTCCCT TGTATGCGGT TGGCGTGTTT
CTCTCATTCA CACTCTCGCA ATCGGGGATG GTGTTGCGCT GGTTGCGGCT CAAAACCAAG
GGTTGGCAAC TTAATTTAGT GGTGAATGCA GTTGGCGCGA TCGCAACTGG GATCGTTTTG
ATCATCAACG GCACAACGAA ATTCAAAGAA GGTGCATGGT TGGTGGTTAT TTGTATTCCA
ATTCTCGTTT TGATTTTTAC TACGATCAAT CGTCATTACA AAGGCGTAGC CAAACAACTT
TCATTGGAAG GGTTTAGCAA ACCCGTGCCA TTAGAAAATA ATGTGATTGT GCTCGTATCA
TCATTGCATC GTGGCACGGT TAAAGCGCTT GAATATGCCA AATCAATTGC TCCAGGTAAA
GTTCGCGCTT TGTATATTGA ATTTGAGCAT GAACACGAAA AAACTGAACG TCTACAAGAA
CGCTGGCAAC AGTGGGAGCC AGATGTGCCC TTGGATATTG AAATATCTAA ATATCGTTCA
TTGTTACGCC CAGTTTTACG CTATGTTGAT CGGATTGAAG CTGAGCGCAA TGATGATATT
CTAACCATTA TCTTGCCTGA ATTTATTCCG GCGCGAATTT GGGAATATGC CTTACATAAC
CAAACCGCCT TCTTCTTGAA AGGTGCGCTG CTATTCCGAC GCAATAAAAT CGTGATTAGC
GTGCCATATC ATCTTGAACG CTAA
|
|---|
| Protein sequence | MLTQLKGVLV GNPLETAAQS HERLDKKTAL AVFSSDALSS VAYATEEMLV HLVPAGIIAF
SSSLWLGIGI AVLLMIVTIS YRQTITAYPS GGGSYIVASD NLGTLPGLIA GGALLIDYIL
TVAVSISSGV SQLISLVEPL RDYRIEICLI GILILTLANL RGIRESGAIF SLPTYFFITV
IMLTLGYGFY KQFTGDIQPL VLSDNLMGPH EQSFSPFGTE AMTAFLLMGA FASGCSALTG
VEAISNGVPA FRKPEPHNAR VTMVWMAGLL LVMFAGITWF AHKYGARPQF NETVISQIGR
GIWGRTTGSE TGFPKVMHGM LQISTAAILL VAANTSYADF PRLMSLLARD GFLPRQFSSL
GDRLVFSNGI LFLAVAAALL VIGFDGSVTN LIPLYAVGVF LSFTLSQSGM VLRWLRLKTK
GWQLNLVVNA VGAIATGIVL IINGTTKFKE GAWLVVICIP ILVLIFTTIN RHYKGVAKQL
SLEGFSKPVP LENNVIVLVS SLHRGTVKAL EYAKSIAPGK VRALYIEFEH EHEKTERLQE
RWQQWEPDVP LDIEISKYRS LLRPVLRYVD RIEAERNDDI LTIILPEFIP ARIWEYALHN
QTAFFLKGAL LFRRNKIVIS VPYHLER
|
|---|
| |