| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1190 |
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| Symbol | |
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| ID | 5733083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1367183 |
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| End bp | 1369144 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641278330 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001543966 |
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| Protein GI | 159897719 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000537417 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATCA AACAGCTACT CATCGGGAAG CCGTTCCCCA GCAGTAGTGC CCAGCACGAA
CGGCTCGACA AAATTCGCGG ATTGGCAGTC TTTGCATCCG ACCCAATTAG CTCCAATGCC
TATGCCACTG AAGCGATTAT GCGGGTGCTG ATTTTGATCA GCGCCGCAGC ATTAAGTTAC
ACCTTGCCGA TTGCGATCGG GATTGCGGCC TTGGTGCTGT TGGTCGTCTT GAGCTACAAC
CAAACCATTC ACCACTACCC AATGGGTGGC GGCGCGTATA TGGTCAGTAA GGATAACCTC
GGTCGCACAG CTTCATGGTT GGCAGGTGCT TCGATTCTTA GTGATTATGT GCTGACCGTG
GCGGTTTCGG TTTCGGCGGG GGTTAAAGCA ATTTCTTCGG CCTTCCCCGA TGTCGCATTC
TTTCATGAGC ATCGGGTATT AATCGGAATT GGGATTATCC TTTTAATTAC CTGGCTGAAC
TTACGTGGTG TGCGCGAAAG CGGCACGATC TTTGCCATCC CCACCTATGC CTTTGTGTTT
GGGGTGTTCG TAGTGATCGC GATTGGCCTT GCCCGCTATT TTGGAATTTT CGGCGAGCCA
TTGCCACCAC GCAGCGTCGC AACCGACGAA ACCGCTCGTT CAGGCCTTGA TAACTTTGGC
TTGATCTGGC TGGTCTTGCG GGCCTTTGCT GGTGGTTGTA CCGCCTTGAC TGGGATTGAA
GCAATCAGCG ACGGCGTACA AGCGTTTCGT AACCCAGCGC CAAAAAATGC GATCATTACC
ATGCGAGCCA TGGCCGTCAT GGCCATGACC TTGTTTATTG GAATTAGCTT TATTGCTACC
CATATTCCGA TTACCCTGCT GCATGAAGGT GGCGAGAGTG TACTTTCGCA AATGACACGC
ACGATTGTTG GTAGTGGGTT TCTGTACTAC TGGGTTCAAT TTACCACCAT GTTGATTTTG
ATCCTAGCTG CTAACACTGC TTATGCCGAC TTCCCACGGA TCGCGGCCTT CTTGTCGAAT
GACGGTTTCT TGCCGCGTTG GCTCTCGCGC TTGGGTAGCC GTTTGGTCTA TAGCTCAGGC
GTGATCGCGC TGGCCTTTTT GGCCTCGGCC TTGCTGGCAG CTTTCGGCGG CGAAGAACAT
CACCTGTTGC CATTGTATGC GATTGGGGTG TTCCTCTCGT TTACGCTTTC GCAAGCTGGC
ATGATTGTGA TGTGGCGCAA AGTTGCCAAA CTCAAGCCAG GCGAAAGCCT CGACACTGGC
ATCACCACTC TGCACTATGA GCCAAACTAC AAGCTCAAAC GAATTCCCAG CATCATTGGG
GTTGGCTTGA CGGCTGTGGT TTTGGTGGTG TTGACAGTTA CCAAATTTAC CGAAGGTGCA
TGGCTGATTA TTGTGGCCTT GCCGTTGATC ATGCTTTTGT TCCGCAAGAT CAAAGCACAC
TATGACCATG TGGCAACCAA TTTGAGCCTA ACAGGCTTGA AACCAAGCGA TTTGCGTTCG
CCCGCTGATG TGGCGATTGT GCCAGTTGGC AGCATTCATC GTGGCTCGTT GCGTGCGATC
AAATATGCCT TGAAACTAAC CGACGATGTG CGCGTGGTCC AAGTTGTTGG TAGCGAAGAG
GAAGAAATCA AAACCCGCAA ACGCTGGGAA CAGTGGGACG AAGTGCTGGG CAAGGCCAAA
TTGGTCTTCT TGCACACCGA CTACCGCGAT TATCTCACGC CATTGGTCGA TTACGTCGAT
CAAGTCAACA ACAAGGAATT TCCAGGCGAT TTGATTACCG TGGTTATTCC GGAGTTTGTG
CCCGATTCGA CCATGGCCAA AGTGCTGCAC AACCAAACTG CTGTGATGCT ATTGCTGGCA
TTGCGCAAAT ATGAAGATGT GGTGGTAATC AGCGTCCCTT ATCACTTGCA CTATATTCCA
ACTGGCTCGG AAGATATTGT GGCCCAAAAA CCAGCCGCCT AA
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| Protein sequence | MNIKQLLIGK PFPSSSAQHE RLDKIRGLAV FASDPISSNA YATEAIMRVL ILISAAALSY
TLPIAIGIAA LVLLVVLSYN QTIHHYPMGG GAYMVSKDNL GRTASWLAGA SILSDYVLTV
AVSVSAGVKA ISSAFPDVAF FHEHRVLIGI GIILLITWLN LRGVRESGTI FAIPTYAFVF
GVFVVIAIGL ARYFGIFGEP LPPRSVATDE TARSGLDNFG LIWLVLRAFA GGCTALTGIE
AISDGVQAFR NPAPKNAIIT MRAMAVMAMT LFIGISFIAT HIPITLLHEG GESVLSQMTR
TIVGSGFLYY WVQFTTMLIL ILAANTAYAD FPRIAAFLSN DGFLPRWLSR LGSRLVYSSG
VIALAFLASA LLAAFGGEEH HLLPLYAIGV FLSFTLSQAG MIVMWRKVAK LKPGESLDTG
ITTLHYEPNY KLKRIPSIIG VGLTAVVLVV LTVTKFTEGA WLIIVALPLI MLLFRKIKAH
YDHVATNLSL TGLKPSDLRS PADVAIVPVG SIHRGSLRAI KYALKLTDDV RVVQVVGSEE
EEIKTRKRWE QWDEVLGKAK LVFLHTDYRD YLTPLVDYVD QVNNKEFPGD LITVVIPEFV
PDSTMAKVLH NQTAVMLLLA LRKYEDVVVI SVPYHLHYIP TGSEDIVAQK PAA
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