| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1188 |
|---|
| Symbol | |
|---|
| ID | 5733081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 1364922 |
|---|
| End bp | 1366547 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641278328 |
|---|
| Product | FHA domain-containing protein |
|---|
| Protein accession | YP_001543964 |
|---|
| Protein GI | 159897717 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases
[COG1716] FOG: FHA domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00110568 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGTC GCATTGCACT TGTTTTTTGT TTGATCTTGC TGGTCGGCAC GCCAGTCTAT
GCCCAAAATG CCTTAACTGG CCCACCCAAC GACCCCGACG CAAATAAACA ATGGGTCATT
CGCCAACTTG GTTTAGCGTG TGCATGGGAG CATTTGACGG GTAACTCCGA TGTTACTGTG
GCCGTGATCG ACTCTGGCGT TGATATGAAC CACCCCGATT TGGTCGATGT CTTGCGCACC
GACGGCTTTG ATGCTGTCGA TGGCGATGAT GATCCATCGG ATGAGAATGG CCACGGAACC
CATGTTTCAG GCATTATTGC CGCCACCATC AACAACAGTA AAGGAATTGC AGGGGTTGCC
GGTGGGGGCA CGCGCATTTT GCCAATTCGG GTGATGGCTG CCGATGGTTC GGGCACGAAT
CAAGATATTA TTGCGGGCAT TCGCTATGCC GTTAGCAAAA ATGTCCAGAT CATCAATATG
AGCCTTGGCT CGATGTTACC GCTCGATAGC GAAGATATTG TTGAGGCAAT CAAAGAGGCC
GATGCCGCTG GCGTACTGGT GATTATCGCC GCTGGTAATT CGTTTGTGCC CTTGCCCAAC
TTCGCCTTTG GGGTTGAAGA ATTTGCCATG GTCGTGGCCG CAACTGATCC TGATGATCGC
AAAACCGATT TTTCGAACTA TGGTAAGTGG ATTTCGGTTT CGGCACCAGG GGCAGGCATT
TACTCAACAA TGCCCACCTA CGATGTGTAT ATGACCAGTC AGTTGCCTGC TGAAGAACGC
TTCAACAAAA ACTACGATCA AATGAGCGGC ACATCGCAAG CTACGCCAGT GGTTGCTGGC
TTGGCAGCCT TGCTATTTGC CCAACACCCC GATTGGAATG CCGACCAAGT ACGGGCTGAA
ATCGAAAAAA CTGCTGATGA TATTTCAGCG CAAAATCCGA TTAAGCGCTA TGGCCCAATC
ACCTATTTCG AGCCAAGCAA CCTTGGCAAA GGCCGTGTCA ATGCTTGCAA TGCCTTGGGT
GGCCCAGTTA AAGGTAGTGC TGCAGCAGTT GGCGGCCCTG AAGGAAAATC CAATTTAATC
ATGCTGCTTG GGTTTAGCGC GGTCATGTTG GTAGTTTTGG GCGGATTAAC CGTCTTTTTA
ATTCGCCGTC GCAAGCACAA CGCCCGCCCT GCGGCGATTC CCGCTGGTGG TTTTGCCCCA
CCGCCACCAA TTCATTATGA TCAAGCAATG GCCCAACAGC AACGCAACCT TGCCTCGCAA
CCAATCGTCG GATCAACGCC GCCATTGAAC CAGAGTTATG CCCCACCCAG CGCGGCTCCG
GCAGGCGGGC CAGCGTGGGG CAAATTAACG GTTGTCCGGG GAGCCGAATT GAACAAGTTC
TATTTGCTGC GTGAAAATCA AATTTTTATT GGCCGTGAAG CCTCGCTTGC CGTGGCAATT
AGCGGTGATA GCACCGTTTC ACGTCGCCAT ACGATCATCT ATCGTGATCC TCGTGGCATT
GAAATTGAAG ATGCAGGCAG CAGTCATGGC ACCAAAATCA ACGGCATTCC AGTACAAGGC
CGCCAACTGG TTCGACCAGG CGATGTGATC GAAGTTGGGC AGACCCATTT ACGTTTTGAG
GGTTAA
|
|---|
| Protein sequence | MSRRIALVFC LILLVGTPVY AQNALTGPPN DPDANKQWVI RQLGLACAWE HLTGNSDVTV
AVIDSGVDMN HPDLVDVLRT DGFDAVDGDD DPSDENGHGT HVSGIIAATI NNSKGIAGVA
GGGTRILPIR VMAADGSGTN QDIIAGIRYA VSKNVQIINM SLGSMLPLDS EDIVEAIKEA
DAAGVLVIIA AGNSFVPLPN FAFGVEEFAM VVAATDPDDR KTDFSNYGKW ISVSAPGAGI
YSTMPTYDVY MTSQLPAEER FNKNYDQMSG TSQATPVVAG LAALLFAQHP DWNADQVRAE
IEKTADDISA QNPIKRYGPI TYFEPSNLGK GRVNACNALG GPVKGSAAAV GGPEGKSNLI
MLLGFSAVML VVLGGLTVFL IRRRKHNARP AAIPAGGFAP PPPIHYDQAM AQQQRNLASQ
PIVGSTPPLN QSYAPPSAAP AGGPAWGKLT VVRGAELNKF YLLRENQIFI GREASLAVAI
SGDSTVSRRH TIIYRDPRGI EIEDAGSSHG TKINGIPVQG RQLVRPGDVI EVGQTHLRFE
G
|
|---|
| |