Gene Haur_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1182 
Symbol 
ID5733075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp1356745 
End bp1357905 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content53% 
IMG OID641278322 
ProductROK family protein 
Protein accessionYP_001543958 
Protein GI159897711 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGGAC TGCCCAAGAA AGCCAGTCGG GAGCAAAGCA AGCTTCACAA CTACCGACTT 
GTCTTCAAAG CCATCTACGA CGGTGGCGCG ATTAGTCGGG TGGATGTAGC ACGCTTAACC 
AACCTCACGC CAACCACAGT TTCGAGTAAC GTCGCGATCC TACTCGAAGA AGAATTGGTG 
CAAGAAGTCG GGTTAGCGCC CTCTGGTGGT GGAAAGCCAG CGACATTGCT GAGCGTATTG 
GATGATGGTC GCCACTTGAT AGGTTTGGAT GTTGCGGGAC ACGAACTGCG GGGCACGATC 
ATCAACTTAC GTGGGGCAAT TCGCCAACGC CAAACGCTCG CGCTGAATGG GGGCAATGTT 
CTCGAACAAT TGTATCAACT GATTGATCAA TTGCTAGCGA ACACCCACAG CCCAGTTCTC 
GGAATTGGCA TCGGCGCACC AGGGGTCATT AACACCACCG CTGGAGTTGT CCAACAAGCA 
GTCAACCTTG GTTGGCACAA TCTCGCACTC CGCGATTTGT TGGGCAAGCG TTATGGGTTA 
CCGGTCTATT TGGCCAACGA TAGTCATGTA ACGGCGATTG CTGAACACAC GTTTGGCAGC 
CAGCGCAACG CGGCAAACCT TGTGGTGATC AACGTTGGGC GTGGGATCGG CGCAGGCATT 
TTTATCAATG GTCGAATTGT TGGTGGTGAT GCTTGGGGAG CGGGTGAAAT CGGTCACGTC 
GTGGTTCAAC CTCATGGAAC TCTCTGTCGT TGTGGCCATT ATGGCTGCCT CGAAACTGTT 
GCCAGCACAA GTGCGCTGCT AACAAAACTT GATGCAACCC AACCACAATC ACAGCCATGG 
ACGATTGCCG AGGTCCAAGC GGCCTTAGCC GCGAATGATC CGACTGTCCG AGCCTTGGTT 
GACGAAGCTG CCTACTATCT TGGCATCGCC ATTGCAAATG TAGTGGGTTT GCTCAACGCT 
CAATCAATTA TCCTTGCTGG GTCGCTGGCC CAACTTGGCA ATGATTTACT CCAACCGTTA 
CGCCGTTCGC TAGCACAACA CGCTTTGCAG ACTTTGGTCG CCGCCACCGA TGTGCAAGTG 
AGCACCCTCG GCAGCGATAT CGTTACCCTA GGTGCAGCAG CTCTGTTACT AGCCAATGAG 
CTAGGCATTG TTCGGGATTA A
 
Protein sequence
MQGLPKKASR EQSKLHNYRL VFKAIYDGGA ISRVDVARLT NLTPTTVSSN VAILLEEELV 
QEVGLAPSGG GKPATLLSVL DDGRHLIGLD VAGHELRGTI INLRGAIRQR QTLALNGGNV 
LEQLYQLIDQ LLANTHSPVL GIGIGAPGVI NTTAGVVQQA VNLGWHNLAL RDLLGKRYGL 
PVYLANDSHV TAIAEHTFGS QRNAANLVVI NVGRGIGAGI FINGRIVGGD AWGAGEIGHV 
VVQPHGTLCR CGHYGCLETV ASTSALLTKL DATQPQSQPW TIAEVQAALA ANDPTVRALV 
DEAAYYLGIA IANVVGLLNA QSIILAGSLA QLGNDLLQPL RRSLAQHALQ TLVAATDVQV 
STLGSDIVTL GAAALLLANE LGIVRD