Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1181 |
Symbol | |
ID | 5733074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 1355675 |
End bp | 1356685 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641278321 |
Product | ROK family protein |
Protein accession | YP_001543957 |
Protein GI | 159897710 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATCAAC GACAGCGCCG GAACGCCAAT GGCTGGCGGC TGGGAGTCGA TGTAGGGGGG ACGAAAATTG CCACCCTACT TGTCGATGGC GATAATCGAG TTTGGGCCAG CGTTCAACGC CCAACCGATA CCGCAACTCC AGACCATGCC CTCAAGTCTC TTGCTGATGC GATTTGGGAA ACCTTGAAAC AAGCCGACCT ACCCATTCGG CTCCTTGCGG GCATTGGGAT TGGCATTCCA GGCCAAGTCG ATACGCAGAG CGGGATTGTT CGGCACGCCG TCAATCTTGG CTGGCAAGCA GTTGATCTAC GTGGATTCAT CAACGCAACC TTTGGCACGG CCTGTGTGAT TGAAAACGAT GTTCGAGCAG CAGCATTAGG CATTCAACGC TATTGGTTGG CTGGTTCGAT CGATTCGATG TTATATGTTA GTATAGGCAC TGGCATAGCC GCTGGCATGA TTCTTGATGG TACTGTCTAC CGTGGTAGTC ACGGAATGGC GGGCGAAATC GGCCATGCAC GCTTCGGATC ATCAACAATT CGCTGTCGCT GTGGCAATTA TGGCTGTCTT GAAGCCATCG TTGCTGGGCC AGCAATTGCC AACTATGCAC ACTCTCTGCT CTCAACATTC CCGCATAGCC AACTGCATCA ACTCGATTCG ATAACCACTC CAGCAGTTTA CGCCGCTGCT GAAGCTGGCG ATGATTTAGC GTTGGCAGTT GCCCACATGG TTGGCGAACA ACTTGCTCAA GCCCTCTATA CCATGGTGCT TGCCTACGAT TGCGATCATA TTGTGCTTGG AGGCGGTGTT AGCCGCGCAG GCTCAGCCTT CTTCGCACCA ATCGAACAAG CACTTGATGT CTTACGTCAG CAAAGTTCTC TAGCAACATC ATTACTTCCG ACGGGGCGGG TTAAGCTCTT AGATCGTGAT TTTGCTGCTG GTGCATGGGG CGGAATCGCC TTGCTCGATA GCCAAGCGTT GGCGCGGGTT GCGCAAACGC AACTGGCATA A
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Protein sequence | MDQRQRRNAN GWRLGVDVGG TKIATLLVDG DNRVWASVQR PTDTATPDHA LKSLADAIWE TLKQADLPIR LLAGIGIGIP GQVDTQSGIV RHAVNLGWQA VDLRGFINAT FGTACVIEND VRAAALGIQR YWLAGSIDSM LYVSIGTGIA AGMILDGTVY RGSHGMAGEI GHARFGSSTI RCRCGNYGCL EAIVAGPAIA NYAHSLLSTF PHSQLHQLDS ITTPAVYAAA EAGDDLALAV AHMVGEQLAQ ALYTMVLAYD CDHIVLGGGV SRAGSAFFAP IEQALDVLRQ QSSLATSLLP TGRVKLLDRD FAAGAWGGIA LLDSQALARV AQTQLA
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